Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1723 172 1e-37 seq1796 165 2e-35 seq557 125 2e-23 seq2729 123 6e-23 seq3251 89.7 1e-12 seq1867 87.8 4e-12 seq5794 84.2 5e-11 seq2790 84.2 5e-11 >seq1723 Length=56463 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || ||||| || || |||||||||||||| |||||| || ||| Sbjct 44047 CAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCCGAC 44106 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||| || ||||| || || || ||||| || || || ||| Sbjct 44107 ACCATCGATAACGTTAAGGCAAAAATCCAGGATAAGGAGGGTATCCCCCCTGATCAACAA 44166 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || ||||||||||| | |||||| | ||||| ||| || Sbjct 44167 CGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAACATC 44226 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| || || || || ||| || Sbjct 44227 CAGAAGGAATCCACCCTTCACCTCGTTCTG 44256 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || ||||| | ||||| || |||||| Sbjct 44275 CAAATATTCGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAGGTCGAGTCATCAGAC 44334 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| ||||| || || || || ||||| |||||||| Sbjct 44335 ACGATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAGCAG 44394 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| ||||| || ||||| | || || | || || ||| | Sbjct 44395 CGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACGCTGTCGGACTACAACATT 44454 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || ||||| Sbjct 44455 CAGAAGGAGTCGACTCTTCATCT 44477 >seq1796 Length=58898 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || ||||| || || |||||||| ||||| |||||| || ||| Sbjct 51720 CAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCCGAC 51661 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||| || || || ||||| || || || ||| Sbjct 51660 ACCATCGATAACGTTAAGGCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAACAA 51601 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| |||||||| || ||||||||||| | |||||| | ||||| ||| || Sbjct 51600 CGTCTGATCTTTGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAACATC 51541 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 51540 CAGAAGGAGTCCACCCTTCACCTCGT 51515 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || || || || || | ||||| || |||||| Sbjct 51492 CAAATATTTGTCAAAACCCTCACGGGTAAGACTATTACGTTGGAGGTCGAGTCATCAGAC 51433 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| || || || || ||||| |||||||| Sbjct 51432 ACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAGCAG 51373 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| ||||| || || || | || || | || || ||| | Sbjct 51372 CGCCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGTCGTACGCTGTCGGACTACAACATT 51313 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || ||||| || || ||||| Sbjct 51312 CAGAAGGAATCGACTCTTCATCT 51290 >seq557 Length=42797 Score = 125 bits (138), Expect = 2e-23 Identities = 156/210 (74%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| || || || ||||| |||||||| || ||| ||| Sbjct 24126 CAGATCTTTGTCAAGACTCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGAC 24067 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAG-GAATCCC---TCCGGACCA 178039 || ||||| ||||| || | ||| || ||||| || | | |||| ||| ||||| Sbjct 24066 ACGATCGACAACGTGAAGGCCA-GAT-CAAGACAAGGAGGCGNNTCCCCCGTCCCGACCA 24009 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 |||||| || ||||| ||||| || ||||||||||| || | |||||| | ||||| || Sbjct 24008 GCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTTTCGGATTACAA 23949 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | |||| || || || || || || ||||| Sbjct 23948 CATCCAGAAGGAGTCCACTCTTCACCTTGT 23919 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || || ||||| ||||| || ||| ||| Sbjct 23896 CAGATCTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCCGAC 23837 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || ||||| || || || || || ||||| || Sbjct 23836 ACGATCGATAATGTTAAGGCGAAGATCCAAGACAAGGAGGGTATTCCCCCCGACCAACAG 23777 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||||||||||| || Sbjct 23776 CGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACACTCTCCGATTATAACATC 23717 Query 178104 CAAAAAGA 178111 || || || Sbjct 23716 CAGAAGGA 23709 >seq2729 Length=38494 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || ||||||||||| ||||| || ||| ||| Sbjct 165 CAGATCTTCGTCAAGACTCTCACGGGTAAGACGATCACCCTGGAGGTCGAGTCCTCTGAC 224 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| ||||| || || || ||||| || Sbjct 225 ACGATCGATAATGTCAAGGCGAAGATCCAGGACAAGGAAGGTATTCCCCCCGACCAACAG 284 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||||| || || || | || || | || || || || Sbjct 285 CGTCTCATCTTCGCTGGAAAGCAGCTTGAGGACGGTCGCACGCTCTCTGACTACAATATC 344 Query 178104 CAAAAAGA 178111 || || || Sbjct 345 CAGAAGGA 352 >seq3251 Length=9849 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || || || |||||||| || || |||||||| || || ||||||||||||||| | ||| Sbjct 7434 ATTCCCCCTGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGCACT 7493 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || ||| || ||| ||||||| ||||| || || || ||||| Sbjct 7494 CTCAGCGACTACAACATCCAAAAGGAATCTACCCTTCACCTTGT 7537 >seq1867 Length=52122 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| |||||| Sbjct 27886 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCAGAC 27945 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || || || ||||| |||||||| ||||| Sbjct 27946 ACCATCGATAATGTTAAGGCCAAGATCCAGGACAAGGAAGG 27986 >seq5794 Length=685 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || ||||||||||| |||||||| || ||| Sbjct 37 CAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 96 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || || ||| ||||| |||||||| ||||| Sbjct 97 ACCATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGG 137 >seq2790 Length=23748 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || ||||||||||| |||||||| || ||| Sbjct 8703 CAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 8644 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || || ||| ||||| |||||||| ||||| Sbjct 8643 ACCATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGG 8603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203593643993286