Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq557 154 1e-32 seq1723 149 6e-31 seq2729 131 2e-25 seq1796 129 5e-25 seq2472 100 3e-16 seq2186 100 3e-16 seq3251 95.1 1e-14 >seq557 Length=42797 Score = 154 bits (170), Expect = 1e-32 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || |||||||||||||| |||||||| |||||||| ||||| |||| || |||||| Sbjct 23697 TGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGC 23756 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 ||||||||||| || || ||||||||||| | ||||| | |||||||| | || | || Sbjct 23757 TTGCCGGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGT-CTTGGATCTT 23815 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 || | ||| | | |||||| ||||| ||||||| || || || |||||||| Sbjct 23816 CGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGT 23875 Query 41839 CAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| |||||||| Sbjct 23876 GAGGGTCTTGACGAAGATCTGCAT 23899 Score = 111 bits (122), Expect = 1e-19 Identities = 168/233 (72%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| || || || Sbjct 23901 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 23960 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC----CGC 41751 || ||||| |||| ||||||||||||||||| || || || || || ||||| || Sbjct 23961 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGG 24020 Query 41752 GGGA-ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGAC 41809 |||| ||| |||||||| | ||| | | || | ||| | | | |||||| ||| Sbjct 24021 GGGANNCGC-CTCCTTGT-CTTGA--TCTGGCCTTCACGTTGTCGATCGTGTCGGAGGAC 24076 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| | ||| || || || ||||| || ||||| || || |||||||| Sbjct 24077 TCGACCTCGAGCGTGATGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 24129 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| ||||||||| || || || || ||| Sbjct 24131 CCGCCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAG 24190 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| |||| |||||||||||||| ||||| |||| |||||| || || Sbjct 24191 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATC 24243 >seq1723 Length=56463 Score = 149 bits (164), Expect = 6e-31 Identities = 173/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| ||| || ||| ||||||||| ||||||||||| || Sbjct 44042 CCACCGCGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAC 43983 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| ||| |||| ||||||||||| || ||||| || || ||||| || || | |||| Sbjct 43982 AAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 43923 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CA---GTGTCGCTCGACTC 41811 | || ||||||||| ||| || ||| |||| | || |||||| |||||| Sbjct 43922 ATGCCCTCCTTGTCTTGGATCTTGGCCTT----GACGTTATCAATGGTGTCGGACGACTC 43867 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || |||||||| ||||| ||||| |||||||| Sbjct 43866 GACCTCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 Score = 131 bits (144), Expect = 2e-25 Identities = 156/209 (75%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||||||| || || ||||||||||||||| ||||| || || || || | || || | Sbjct 44479 CCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAA 44420 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 ||||||| |||||||| || |||||||| ||||| | |||| | |||||| ||| || Sbjct 44419 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGA 44360 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | || |||| ||| | | | ||||| ||||| ||||||| ||| || || ||| Sbjct 44359 TCTTGGCCTTC-ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTA 44301 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| ||||| || ||||| Sbjct 44300 CCCGTGAGGGTCTTGACGAATATTTGCAT 44272 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| || || | || || ||| ||||||||| ||||||||||| | Sbjct 43814 CCACCGCGGAGACGCAAAACTAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCACTG 43755 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| || || || ||||| |||||||| | ||| Sbjct 43754 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATTAGGCGTTGTTGGTCAGGAGGA 43695 Query 41756 A 41756 | Sbjct 43694 A 43694 >seq2729 Length=38494 Score = 131 bits (144), Expect = 2e-25 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || || ||||||||||| || || ||||| ||||| ||||| |||| || |||||| Sbjct 364 TGAAGGGTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAAGCTGC 305 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 || || ||||| || || ||||||||||| | ||||| | ||||||||| ||| || Sbjct 304 TTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGATCTTC 245 Query 41780 TGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCG 41837 ||| || || | ||||| ||||| ||||||| || ||||| ||||||| Sbjct 244 GCCTTGACATTATCG--ATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTACCCG 187 Query 41838 TCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| |||||||| Sbjct 186 TGAGAGTCTTGACGAAGATCTGCAT 162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| || || || || || Sbjct 160 CCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGAA 101 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || || |||| || || |||||||||||||| || || ||||||||||| | ||| Sbjct 100 AGAGTACGGCCGTCTTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGAGGG 41 Query 41755 AACGCTCTCCTTGTC 41769 | || ||||||||| Sbjct 40 ATGGCCCTCCTTGTC 26 >seq1796 Length=58898 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| ||||||||| ||||| ||||| || Sbjct 51725 CCACCACGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 51784 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| ||| |||| || ||||||||||| ||||| || || || || || || | |||| Sbjct 51785 AAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGA 51844 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| | || | || || | ||| | | | |||||| |||||| || Sbjct 51845 ATGCCCTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAAC 51903 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || |||||||| || || || || |||||||| Sbjct 51904 CTCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||||||| || || |||||||||||||| ||||| || || || || |||| || | Sbjct 51288 CCAGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAA 51347 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 ||||||| |||||||| || |||||||| ||||| | |||| | |||||| ||| || Sbjct 51348 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCC-TGG 51406 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | || || | ||| | | | ||||| ||||| ||||||| ||| || || ||| Sbjct 51407 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTA 51466 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || || |||||| Sbjct 51467 CCCGTGAGGGTTTTGACAAATATTTGCATG 51496 Score = 102 bits (112), Expect = 8e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| ||||||||| ||||| ||||| | Sbjct 51953 CCACCACGAAGACGCAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTG 52012 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| |||||||| |||||||| | ||| Sbjct 52013 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTCAGGAGGA 52072 Query 41756 A 41756 | Sbjct 52073 A 52073 >seq2472 Length=20097 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 92 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 151 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| | || |||||||||||||| ||||| |||| |||||| || || Sbjct 152 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATC 204 >seq2186 Length=87839 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || ||||| |||||||| ||||| |||||| | Sbjct 62869 CCACCACGAAGACGGAGCACAAGGTGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTG 62928 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 62929 AGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 62988 Query 41756 ACGCT 41760 | ||| Sbjct 62989 ATGCT 62993 >seq3251 Length=9849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||||| || ||||| |||||| | Sbjct 7555 CCACCACGAAGACGGAGCACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGCTG 7496 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 7495 AGAGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 7436 Query 41756 ACGCT 41760 | ||| Sbjct 7435 ATGCT 7431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462252458882800