Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq524 132 4e-26 seq57 109 5e-19 >seq524 Length=649165 Score = 132 bits (146), Expect = 4e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||| | |||||| ||||| ||||| || || ||| | Sbjct 613231 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCCGGCGAA 613290 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| ||||||||||| ||||| || |||||||||||||| || || || || | Sbjct 613291 GATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 613350 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| ||||||||||||| | ||| | ||| ||||| ||||| || || || Sbjct 613351 ATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAGCGTCTTCAC 613410 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 613411 GAAGATCTGCATG 613423 Score = 122 bits (134), Expect = 8e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||||||||| | ||||| |||||||||||| || ||||| | Sbjct 613516 CTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 613575 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || |||||||| ||||| || |||||||||||||| || || || || | Sbjct 613576 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 613635 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| || ||||||||||| || | || |||||||| || || || || Sbjct 613636 ATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 613695 Query 118727 AAAAATCTGCATGGC 118741 ||| |||||||| || Sbjct 613696 AAAGATCTGCATTGC 613710 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || || ||||| ||| | |||||| |||||||| || || || ||| | Sbjct 612724 CTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGAGTTGCTTGCCGGCGAA 612783 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || ||||||||||| ||||| || || || |||||||| ||||| || || | Sbjct 612784 AATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGATTTTCGCCTTGACGTT 612843 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| || || | | ||||||||||| || | || ||||| || || || || || Sbjct 612844 GTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGCCAGTAAGCGTCTTGAC 612903 Query 118727 AAAAATCTGCATG 118739 ||||| |||||| Sbjct 612904 GAAAATTTGCATG 612916 >seq57 Length=599116 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118541 TGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 ||| ||||| || || ||||||||||| | |||||| |||||||||||| || || Sbjct 467707 TGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCC 467766 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || |||| || |||||||| || || || |||||||||||||| || || ||| Sbjct 467767 GGCAAAGATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTCGCTTT 467826 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| ||||| | ||||||||| | || | ||| |||||||| || || Sbjct 467827 GACGTTGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGT 467886 Query 118721 TTTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 467887 CTTAACGAATATTTGCAT 467904 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| || | |||||| || |||||||| Sbjct 468214 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCGAGCTG 468273 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || | ||||| || ||||| ||||| || |||||||||||||| || || Sbjct 468274 CTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 468333 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| | ||| ||||| | || | || ||||| || Sbjct 468334 CGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTGCCAGT 468393 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| ||||||||| Sbjct 468394 GAGTGTCTTGACAAAGATCTGCATG 468418 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || ||||||||||| | |||||| ||||| | ||| Sbjct 467474 TGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCCAACTGC 467533 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| |||||||| |||||||| ||||||||||| || || || Sbjct 467534 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTC 467593 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | || | ||||| | ||| || || | || | ||| ||||| ||| Sbjct 467594 GCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATCGTCTTGCCAGTC 467653 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||||||| Sbjct 467654 AGCGTCTTGACGAAGATCTGCATG 467677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827576577528