Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq524 145 9e-30 seq57 123 3e-23 >seq524 Length=649165 Score = 145 bits (160), Expect = 9e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || |||||||||| || || || | || || |||||||| ||| Sbjct 613511 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 613570 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 || || || || ||||||||||||| ||| | || |||||||||| ||| || ||| Sbjct 613571 GCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 613630 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | | | | |||||||| || || || |||| ||||||||| ||||| || || ||| Sbjct 613631 ACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTC 613690 Query 43167 TTTACAAAGATTTGCATT 43184 || |||||||| |||||| Sbjct 613691 TTGACAAAGATCTGCATT 613708 Score = 136 bits (150), Expect = 5e-27 Identities = 159/211 (75%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 42975 ACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||||| ||||||||||| || |||||||| || | || || ||| |||| || Sbjct 612706 ACCAAGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTC 612765 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 || ||||| || ||||| || || ||||||||||||| ||| | | ||||||||| Sbjct 612766 GAGTTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTG 612825 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 |||||| |||| ||| | | | ||| ||| || || || |||| |||||| || | Sbjct 612826 GATTTTCGCCTTGA-CGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCT 612884 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || |||||||| || || |||||||| Sbjct 612885 TGCCAGTAAGCGTCTTGACGAAAATTTGCAT 612915 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| ||||| ||||| || | ||||| || |||| ||||||||||| || Sbjct 613226 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCCG 613285 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| || || ||||||||||||| ||| | || |||||||||| ||| || ||| Sbjct 613286 GCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 613345 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | | | | ||||| || || || || | ||||| || |||||||| |||||| Sbjct 613346 ACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAGCGTC 613405 Query 43167 TTTACAAAGATTTGCAT 43183 || || ||||| ||||| Sbjct 613406 TTCACGAAGATCTGCAT 613422 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || ||||||||||| | ||| ||||| |||| || || ||| Sbjct 612941 TGCAGCGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTCCGACCGTCCTCGAGTTGC 613000 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| || | ||||||||||||| ||| | | |||||| ||| |||||| Sbjct 613001 TTGCCGGCGAAAATCAAGCGCTGCTGGTCGGGCGGGATCCCCTCCTTATCCTGGATTTTC 613060 Query 43101 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 |||| ||| | | | |||||| || || || || | |||||||| || || || Sbjct 613061 GCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGGGTGATGGTCTTCCCGGT 613119 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 | |||||| |||||||| ||||| Sbjct 613120 CAACGTCTTGACAAAGATCTGCAT 613143 >seq57 Length=599116 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 || |||| || | ||| | ||| |||||| || || |||||||| | ||||| || Sbjct 467459 AAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGG 467518 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 |||| || | |||||| || ||||| ||||| ||||||||||||| || | || |||| Sbjct 467519 CCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCC 467578 Query 43086 TTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 || ||| ||| || |||| | | | ||||||| ||| || || || | |||| Sbjct 467579 TTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTG 467638 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || |||||||| || ||||| ||||| Sbjct 467639 ATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| ||| |||||| || || |||||||| | ||||| || | || || ||||| Sbjct 467701 ATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTG 467760 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| || || || || || ||||||||||| | || | || |||||||||| ||| || Sbjct 467761 CTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTT 467820 Query 43100 TTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158 ||||| ||| | | | ||||||| ||| || || || | |||||| || ||||| | Sbjct 467821 CGCTTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGG 467879 Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || |||||||| Sbjct 467880 TGAGTGTCTTAACGAATATTTGCAT 467904 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || || || || | ||||| || |||| || |||||||| || ||||| Sbjct 467998 CTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 468057 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || ||||||||| ||| || || | ||| Sbjct 468058 AATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 468116 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| |||||||| || ||||| | Sbjct 468117 TGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGTGTCTTGA 468176 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 468177 CGAAGATTTGCAT 468189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813783117520