Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq379 145 2e-29 seq48 113 1e-19 seq124 91.5 3e-13 seq101 87.8 4e-12 >seq379 Length=286460 Score = 145 bits (160), Expect = 2e-29 Identities = 377/570 (66%), Gaps = 11/570 (2%) Strand=Plus/Minus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||||||||| ||| | ||| | | || || Sbjct 220483 TTCAAGACGCTCGAGCGCTCGTATCTCCTGCGGATTAACGGCCGCGTTGCCGAGCGGCCG 220424 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| | ||| | ||| ||| | || Sbjct 220423 CAGCACATGCTCATGCGCGTGGCGGTGGGCATCCACGGCGCGGACGTCGAGCGCGCGATC 220364 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 |||||||||| | ||| || |||| | || || || | ||||||||||||||| Sbjct 220363 GAGACGTACAACCTGATGTCCGAGCGCTACTTCACGCACGCTTCGCCGACGCTCTTCAAC 220304 Query 249013 GCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 ||||| || | || | ||||||||| ||||| ||| | | ||| | || ||||| Sbjct 220303 GCCGGCACGCCGCATC-CGCAGCTGAGCAGCTGCTTCCTTGTCACGATGAAGGAGGACTC 220245 Query 249072 TGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGGG 249128 |||| ||||| || |||||||| | ||||| |||| ||| || || || Sbjct 220244 GATCGAGGGCATCTACGACACGCTCA---AGACGTGCGCGATGATCAGCAAGACGGCCGG 220188 Query 249129 CGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAA 249188 ||| ||||| ||| | || | ||| || |||||||| ||||||||| || || || Sbjct 220187 CGGCATCGGCCTCAACATCCACTGCATTCGCGCGAAGGGCTCGTACATCGCGGGCACGAA 220128 Query 249189 TGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCAT 249248 || ||| | || ||||| ||| | || || | || || || || | | | Sbjct 220127 CGGCCACAGCAACGGCATCGTGCCCATGCTGCGCGCGTACGACTCGACGGCGCGCTATGT 220068 Query 249249 CAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGC 249305 | |||||| ||| | || || ||||||| || || | || |||||| || Sbjct 220067 CGACCAGGGCGGTAACAAGCGTCCCGGCGCGTTCGCGATTTACATCGAGCCGTGGCATGC 220008 Query 249306 CGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCG 249365 || | || || ||||| ||| || |||||| ||||||| ||| | | ||||| Sbjct 220007 GGACGTGTTCGACTTCCTCGACCTGCGCAAGAACCACGGCAAAGAGGAGGTCCGCGCGCG 219948 Query 249366 TGACCTCTTCTACGGCCTGTGGGTCTCCGA 249395 ||||||||||| | || ||| | |||| Sbjct 219947 CGACCTCTTCTATGCGCTCTGGATTCCCGA 219918 Score = 84.2 bits (92), Expect = 5e-11 Identities = 164/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 249867 CAACATGAAGCACCGTCCATGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACATGGT 249926 ||||||| ||||| || ||| | ||||| |||| || ||||||| ||||| Sbjct 265500 CAACATGCGCCACCGGCCCATTGGCGTCGGCGTGCAGGGCCTCGCGGACGTCTTCATGGC 265559 Query 249927 GATGGGATTCCCCTTCGAGTCAGAGGAGGCAGCG-ACGCTAAATAAACAGATTTTCGAGA 249985 | | | | ||||||||| | |||||| ||| | ||| || | ||||| ||||||| Sbjct 265560 GCTACGCCTGCCCTTCGAGAGCGCGGAGGC-GCGCAAGCTCAACCAGCAGATCTTCGAGA 265618 Query 249986 CCATCTATCACG-GGAGCGTCGAGGCGTCCATCGAAAGGGCCAAGATCGACGGACCATAC 250044 ||||||| |||| | || |||||||| || ||| | ||| || || || || ||| Sbjct 265619 CCATCTACCACGCTGCGC-TCGAGGCGAGCAGCGAGATGGCGGCGACGGATGGGCCCTAC 265677 Query 250045 GAGAGTTTTCAGGGGTCGCCCGCGTCGTTCGGGAAGCTTCAGTTTGATCTTTGGGGT 250101 |||| | ||| ||||||||| | || ||||| |||| || || |||||| Sbjct 265678 GAGACGTGGGTGGGCTCGCCCGCGCAGCAGGGCAAGCTGCAGTACGACCTGTGGGGT 265734 >seq48 Length=83013 Score = 113 bits (124), Expect = 1e-19 Identities = 264/391 (68%), Gaps = 8/391 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||||||||| || | ||| |||| || || Sbjct 59518 TTCAAGACGCTTGAGCGCTCGTATCTCCTGCGCATAAACGGCCGCATCGCCGAGCGGCCG 59577 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | |||| || || || || || ||| | ||| | ||| ||| | || Sbjct 59578 CAGCACATGCTCATGCACGTCGCGGTGGGCATCCACGGCGCGGACGTCGAGCGCGCGATC 59637 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 |||||||||| | | | || |||| | || || ||| | ||||||||||||||| Sbjct 59638 GAGACGTACAAC---CTTCG-GAGCGCTACTTCACGCACGCCTCGCCGACGCTCTTCAAC 59693 Query 249013 GCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 ||||| || | || | ||||| ||| ||||| || | | ||| | || ||||| Sbjct 59694 GCCGGCACGCCGCATC-CGCAGCTCAGCAGCTGCTTCCTCGTCACGATGAAGGAGGACTC 59752 Query 249072 TGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 |||| ||||| || ||| |||| || || | |||| |||| || || |||| Sbjct 59753 GATCGAGGGCATCTACGACGCGCTCAAGACTTGC-GCGATGATTAGCAAGACGGCCGGCG 59811 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | ||||| ||| | || | ||| || |||||||| ||||||||| || || || | Sbjct 59812 GCATCGGCCTCAACATCCACTGCATTCGCGCGAAGGGCTCGTACATCGCGGGCACGAACG 59871 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCG 249221 | ||| |||||||||| ||| | || || Sbjct 59872 GCCACAGCAATGGTATCGTGCCCATGCTGCG 59902 >seq124 Length=448922 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| ||| |||| ||| | ||||| || ||||| ||||| ||||| || Sbjct 289430 ACGCCGGCCTTTGCGTAGTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGC 289371 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || ||||||||||| | ||||| || || | ||||||| ||| |||| || || Sbjct 289370 GAGATCATGTCCATGAAGTCGAAGGGATTCGACGAGTTGTAGTGCTTCTCGTTGCCGAGT 289311 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 | || | |||||| || |||| |||||||| |||| |||| | | || Sbjct 289310 GCGACGAGGAGGCGGTCCGCGACGAACTCGATGTACTGGTTCATCAGCTTCGAGTTCATG 289251 Query 157424 CCGATGAGCGCGACGGGAAGCGC 157446 |||||||| | |||||| ||||| Sbjct 289250 CCGATGAGGGAGACGGGGAGCGC 289228 >seq101 Length=461416 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| ||| |||| || | ||||| || ||||| ||||| ||||| || Sbjct 404248 ACGCCGGCCTTCGCGTAGTCGGAGACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGC 404189 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || ||||||||||| | ||||| || || | ||||||| ||| |||| || ||| Sbjct 404188 GAGATCATGTCCATGAAGTCGAAGGGATTCGACGAGTTGTAGTGCTTCTCGTTGCCGAGC 404129 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 | ||| | ||| || || |||| ||| |||| |||| ||| | | || Sbjct 404128 GCGACGAGCAGGCGGTCGGCGACGAACTCGATATACTGGTTCATCAATTTCGAGTTCATG 404069 Query 157424 CCGATGAGCGCGACGGGAAGCGC 157446 |||||||||| |||||| ||||| Sbjct 404068 CCGATGAGCGAGACGGGGAGCGC 404046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073759053424512