Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 2e-11 seq124 82.4 8e-11 >seq57 Length=599116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | || | ||| | ||| || || || || ||||||||||| Sbjct 467677 GCCGCCGCGCAGACGAAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGA 467736 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || ||||| || || || ||| |||| || || ||||| || || || Sbjct 467737 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGG 467796 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || ||| | | || | |||||| | | || || Sbjct 467797 AATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGAC 467856 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||| | ||| || ||||||||||||||| Sbjct 467857 CTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACGAATATTTGCATA 467905 >seq124 Length=448922 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 50493 AGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCA 50552 |||| | ||||||||||| ||||| ||||||| | || ||||||||||| || ||||| Sbjct 289056 AGGCCTCATGCCCGGCCTGACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCATGCA 289115 Query 50553 CACAGACTTTGCGTG 50567 ||| ||||||||||| Sbjct 289116 CACCGACTTTGCGTG 289130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011015678880