Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq112 84.2 1e-11 >seq112 Length=929211 Score = 84.2 bits (92), Expect = 1e-11 Identities = 187/278 (67%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 25291 TCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGT 25350 ||||| |||| ||||| || | |||||| || | | | || || || ||||| |||| Sbjct 920072 TCATCTCGATGGTGGGATACGGCTTGTAACCTTCAACGCAAAAGTCTTCCGCCTTGAAGT 920131 Query 25351 CGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCT 25410 |||| | ||| ||| || | ||| || | || |||||||| || | || | || Sbjct 920132 CGTCAATGCTGGTCACGCTACGGTTAATGCGTAGAGTGGGAAAAGGCCGAGGGGTGCGCT 920191 Query 25411 CGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAG-AGTG 25469 |||||| || | | | || |||||||| |||| ||||| ||||||||||| | Sbjct 920192 GGAGCTGTGTTTGTAAGGCGTCGACGTGATCGCGGTATACGTGCGCGTCTCCCAGCTGAA 920251 Query 25470 TGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAG 25529 | || | ||| |||||| |||| || | || |||||| | |||||||| | Sbjct 920252 TTGA-GAGCTCGTGCGGTTCAGTATCGGTCACATGGGCGATCATGCAGGTGAGGAGCGCG 920310 Query 25530 TAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 ||| ||||| || || || | |||| |||| ||| Sbjct 920311 TAGGATGCGATATTGAATGGAATGCCGAGTCCCAGGTC 920348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135386341982