Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq379 141 2e-28 seq48 84.2 6e-11 >seq379 Length=286460 Score = 141 bits (156), Expect = 2e-28 Identities = 475/746 (64%), Gaps = 54/746 (7%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||| ||||| || |||| ||||| || ||| || || | || | Sbjct 264642 ATGAAGGACGACAGTATCGAAGGCATCTACGACACGCTCAAGGCGTGCGCCATGATCAGC 264701 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 |||| ||| ||||| ||||| | || ||||| | || || || | ||||| Sbjct 264702 AAGAGTGCGGGCGGTATTGGCCTTAACATTCACAACATCCGCGCCAAGGGCTCGTACAT- 264760 Query 363742 CGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||||| ||| || ||||| ||||| || |||||||| || | ||| || || Sbjct 264761 CGCGGGCACGAACGGCGTGTCGAACGGGCTCGTGCCCATGCTGCGCGCGTTCGATTCGAC 264820 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 ||| | ||||| ||||| || || |||||| || |||||||| || || ||||| Sbjct 264821 GGCGCGCTACGTGGACCAAGGCGGCAACAAGCGCCCGGGCGCGTTTGCCATCTACCTCGA 264880 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGA 363917 ||| || | || || || || || || || || || || ||| |||| || |||| Sbjct 264881 GCCGTGGCACCCGGACATCTTCGAATTCCTCGACCTGCGCAAGAACCACGGCAAGGAAGA 264940 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 || | || || || || |||||||| || || ||| || | |||| || |||||||| Sbjct 264941 GG---TCCGCGCGCGGGACCTGTTCTACGCGCTCTGGATTCCCGACCTATTCATGAAGCG 264997 Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 ||| ||||| | ||||||| |||| ||||| |||| || ||||| ||| Sbjct 264998 CGTCGAGGCGAACGCGGATTGGTCGTTCTTCTGCCCGAACGAGGCACCGGGTCTGCACGA 265057 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 || | | ||| | || || || || ||| || || |||||| || || Sbjct 265058 GGTGCACAGCGCCGAGTTTGAGGCGCTCTATGAACGCTACGAGAAGGAGGGTCGCGCGCG 265117 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||| || || || |||||||| |||| ||||| | || ||||||| || || || Sbjct 265118 GAAGGTCATCCCGGCGCAGAAGCTGTGGTACGCCATTCTCGAGGCGCAGATCGAAACCGG 265177 Query 364158 AACACCCTATATGTTGTACAAAGA-------------------TTCGTGCAACCG----- 364193 || | ||| ||||||| || |||||| ||| Sbjct 265178 TGGGCCGTTCATGCTGTACAAGGACGCTGCGAATGGTAAGCAGTTCGTGGCCCCGCGAGA 265237 Query 364194 ----------------------CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGA 364231 |||||| ||||||||| |||| || || || || | Sbjct 265238 TTTGTGCTCATGCATCTCCAGCCAAGTCGAACCAGCAGAACCTCGGCACGATCAAGTCGT 265297 Query 364232 GCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACC 364291 |||||| || |||||||| || || ||| || | ||||| || | ||||| || |||| Sbjct 265298 CCAACCTCTGCACCGAGATCATCGAGTACTCCTCGCCCGATGAAATCGCCGTTTGCAACC 265357 Query 364292 TTGCGTCGATCGCGCTTCCGGCGTTT 364317 | ||||| ||||| || ||| ||||| Sbjct 265358 TGGCGTCCATCGCTCTACCGACGTTT 265383 Score = 129 bits (142), Expect = 2e-24 Identities = 572/897 (64%), Gaps = 34/897 (4%) Strand=Plus/Minus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||||||||||||| |||| || || || || | ||||| || |||||||| | Sbjct 219587 CAAGTCCAACCAGCAGAACCTCGGCACGATCAAGTCGTCGAACCTGTGCACCGAGATCGT 219528 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||| ||| | || || ||||| ||||| || ||||| || || || ||||| ||| | Sbjct 219527 TGAGTACTCTGCGCCGGACGAAGTGGCCGTGTGCAACCTGGCCTCAATTGCGCTGCCGTC 219468 Query 364314 GTTTGTAA--------AAGA--TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCT 364363 || || | |||| | |||| ||| |||| | || | ||||| || Sbjct 219467 CTTCGTGACCGCCGACAAGAAATCGTAC----GACTTCCAGAAGCTGCACGACGTCGCCA 219412 Query 364364 A--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA 364421 | || | || |||| || ||||| | |||||| ||| || || || | || || Sbjct 219411 AGGTCGTCGCAC--GCAACCTGAACAAGATCATCGACGTGAACTACTACCCCGTGCCCGA 219354 Query 364422 AGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 || || || ||||| || || || || || | || || ||||||||||| || Sbjct 219353 GGCGCGCCGCAGCAACATGCGCCACCGGCCCATCGGCATCGGCGTGCAGGGCCTCGCGGA 219294 Query 364482 CGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGA 364541 || || ||||| || || | || || || || || || || || | Sbjct 219293 CGCGTTCATGATCCTGCGCCTGCCGTTCGACAGCCCGGAGGCGCGCAAGCTCAACCTCCA 219234 Query 364542 GATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAA 364601 |||||| || || || || ||||| | || |||| ||| | || | | | Sbjct 219233 GATCTTCGAGACCATCTACCACGCCGCGCTCGAGGCGTCGTCTGAGCTCGCCGAGCGCGA 219174 Query 364602 GGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661 ||| |||| || | | || || ||| |||||| | | |||| || || Sbjct 219173 GGGCCCGTACGAGACGTGGGTCGGCTCGCCTGCGCAGCAGGGCAGGCTGCAGTACGACCT 219114 Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAA 364721 ||| |||||||| | | || ||| |||||| | || ||| | ||| Sbjct 219113 GTGGGGCGTCACGCCGACGGACCTGTGGGACTGGGCGAGCCT------CAAGGAGCAGAT 219060 Query 364722 -----GCATGGTACT-CGCAACTCCCTCGTTACAG-CGCCCATGCCCACGGCTTCTACTG 364774 ||| | || |||||||| || ||| | | |||| ||||| ||||| || || Sbjct 219059 CGCGCGCACAGGCCTGCGCAACTCGCT-GTTGCTGGCGCCGATGCCGACGGCGTCGACGA 219001 Query 364775 CACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCC 364834 ||||||||||| ||||||||||||||| |||| || ||||| | || | |||| Sbjct 219000 GCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCGTACACGAGCAACATCTACACGCGCC 218941 Query 364835 GGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACC 364894 | || || | || || || | ||| || || || | || || ||||| Sbjct 218940 GCGTGCTCGCGGGCGAGTTCCAGGTGGTGTGCCCGTGGCTGCTGCGCGAGCTCGTCGACC 218881 Query 364895 GCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGA 364954 || ||||||||| ||| |||||||||| ||||||||| || || ||||||| Sbjct 218880 GCCGGCTGTGGGACGACCACATGAAGAACCTCATCATCGCCAACGGCGGCTCGGTGCAGA 218821 Query 364955 ACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-C 365013 |||| || || | || || || | ||| | || ||||| ||||| ||||| || || | Sbjct 218820 ACATCCCCGGCATCCCCGACGACGTCAAGGCCATCTACAAGACCGTCTGGGAGATCTCGC 218761 Query 365014 ATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAG 365070 | ||| | | || ||||| || || ||||| || || || || ||||||||| Sbjct 218760 AGAAGAA-GGTGCTCGACATGGCTGCGGACCGCGGCGCGTTCATTTGCCAGAGCCAG 218705 Score = 122 bits (134), Expect = 2e-22 Identities = 345/524 (66%), Gaps = 6/524 (1%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || |||||||| ||| | ||||| || || | || ||||| || |||| || || Sbjct 220432 GAGCGGCCGCAGCACATGCTCATGCGCGTGGCGGTGGGCATCCACGGCGCGGACGTCGAG 220373 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 |||||| || || || || || | || | | | || ||||||||||| |||| | Sbjct 220372 CGCGCGATCGAGACGTACAACCTGAT--GTCCGAGCGCTACTTCACGCACGCTTCGCCGA 220315 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||| || || || | |||| ||| || ||||| ||| | | |||| Sbjct 220314 CGCTCTTCAACGCCGGCACGCCGCATCCGCAGCTGAGCAGCTGCTTCCTTGTCACGATGA 220255 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || || |||||||| |||| ||||| || |||| || || | || ||||| Sbjct 220254 AGGAGGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCAGCAAGA 220195 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCG 363745 || ||||| || || | |||||| |||| || || | ||||| |||| Sbjct 220194 CGGCCGGCGGCATCGGCCTCAACATCCACTGCATTCGCGCGAAGGGCTCGTACAT-CGCG 220136 Query 363746 G-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 | ||| || || || || | || |||||||| || | || ||| || ||| Sbjct 220135 GGCACGAACGGCCACAGCAACGGCATCGTGCCCATGCTGCGCGCGTACGACTCGACGGCG 220076 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | || ||||||||||| || ||||| || ||||| || || || ||||||| Sbjct 220075 CGCTATGTCGACCAGGGCGGTAACAAGCGTCCCGGCGCGTTCGCGATTTACATCGAGCCG 220016 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 ||||| || | || || || || || || || || ||| || |||||||| | Sbjct 220015 TGGCATGCGGACGTGTTCGACTTCCTCGACCTGCGCAAGAACCACGGCAAAGAGGAGGTC 219956 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968 || || || || || |||||||| || ||| || | || | ||| Sbjct 219955 CGCGCGCGCGACCTCTTCTATGCGCTCTGGATTCCCGATCTTTT 219912 >seq48 Length=83013 Score = 84.2 bits (92), Expect = 6e-11 Identities = 339/529 (64%), Gaps = 25/529 (5%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || |||||||| ||| | |||| || || | || ||||| || |||| || || Sbjct 59569 GAGCGGCCGCAGCACATGCTCATGCACGTCGCGGTGGGCATCCACGGCGCGGACGTCGAG 59628 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACA 363567 |||||| || || || || |||| || ||| | ||||||||||| |||| || Sbjct 59629 CGCGCGATCGAGACGTACAACCTTCGGAGCGCTACT----TCACGCACGCCTCGCCGACG 59684 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | ||| || || || | |||| ||| | ||||| || | | |||||| Sbjct 59685 CTCTTCAACGCCGGCACGCCGCATCCGCAGCTCAGCAGCTGCTTCCTCGTCACGATGAAG 59744 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || || || |||||||| |||| ||| | || |||| ||| || | ||| ||||| Sbjct 59745 GAGGACTCGATCGAGGGCATCTACGACGCGCTCAAGACTTGCGCGATGATTAGCAAGACG 59804 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC-GG 363746 || ||||| || || | |||||| |||| || || | |||| |||| || Sbjct 59805 GCCGGCGGCATCGGCCTCAACATCCACTGCATTCGCGCGAAGGGCTCGTACA-TCGCGGG 59863 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 ||| || || ||||| | || |||||||| |||| || ||| || ||| | Sbjct 59864 CACGAACGGCCACAGCAATGGTATCGTGCCCATGCTGCGTGCGTACGACTCGACGGCGCG 59923 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 | || || |||||| || ||||| || || || ||||||| Sbjct 59924 TTGCGGTAAC------------AAGCGCCCCGGCGCGTTCGCGATTTACATCGAGCCGTG 59971 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGA-AAAACACGGGAA--AAGAGGAATT 363923 ||||| || | || || || || || || || | || ||||| || |||||| | Sbjct 59972 GCATGCGGACGTGTTCGACTTCCTCGACCTGCGCATGAACCACGGTAAGGAAGAGG---T 60028 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 || | || || || |||||||| || ||| || | || ||||| || Sbjct 60029 CCGCCCGCGCGACCTCTTCTATGCGCTCTGGATTCCCGA-TATTTTGTG 60076 Score = 84.2 bits (92), Expect = 6e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||||||||||||| |||| || || || || | ||||| || |||||||| | Sbjct 60398 CAAGTCCAACCAGCAGAACCTCGGCACGATCAAGTCGTCGAACCTGTGCACCGAGATCGT 60457 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||| ||| | || || |||||| || || || ||| | || ||||||||||| ||| | Sbjct 60458 TGACTACTCTGCGCCGGACGAGGTCGCGGTGTGCAACTTGGCATCGATCGCGCTGCCGTC 60517 Query 364314 GTTTGT 364319 ||| || Sbjct 60518 GTTCGT 60523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344682617588