Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq524 102 5e-17 seq189 98.7 7e-16 >seq524 Length=649165 Score = 102 bits (112), Expect = 5e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||||||||||| ||||| ||||| || || | | || |||| |||| || Sbjct 613220 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGC 613279 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || ||||| || || || || || || |||| |||| ||| || |||||| || || Sbjct 613280 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTG 613339 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | || ||| || | || || || || | || || || || |||||| Sbjct 613340 GCCTTGACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTC 613399 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | || |||||||| ||||||||| Sbjct 613400 AGCGTCTTCACGAAGATCTGCATG 613423 >seq189 Length=24726 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 4191 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 4250 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||| ||| Sbjct 4251 GCCTGTATTTAGCTTTA 4267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945020121754