Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq57 93.3 4e-14 seq524 89.7 4e-13 >seq57 Length=599116 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| | | || || | ||| | ||| || || || || ||||||||||| Sbjct 467449 ACCGCCACGCAAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGA 467508 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || || || | || || || ||| ||||||| ||||| ||||| ||||| Sbjct 467509 AAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 467568 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || || || ||||| || | | |||| ||||||| || || || Sbjct 467569 GATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAAC 467628 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| || | ||| ||||| ||||| || || || || ||||||||| Sbjct 467629 TTCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATG 467677 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || || | | || | ||| | || || || || || ||||||||||| Sbjct 467675 ATGCCGCCGCGCAGACGAAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCC 467734 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || || |||| || ||||| ||||| || Sbjct 467735 GAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGT 467794 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| ||| | | || | ||||||| || ||| Sbjct 467795 GGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCG 467854 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| |||||||| || || || || || || ||||| Sbjct 467855 ACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACGAATATTTGCAT 467904 >seq524 Length=649165 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||| | ||| ||| || || || || || || ||| || Sbjct 613232 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCCGGCGAAG 613291 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||| ||||| || || ||||| || ||||| ||||| || | | Sbjct 613292 ATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTA 613351 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| || ||||| |||| ||| | ||| ||||| ||||| || || || Sbjct 613352 TCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAGCGTCTTCACG 613411 Query 114372 AAAATCTGCATG 114383 || ||||||||| Sbjct 613412 AAGATCTGCATG 613423 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || ||||||||||| | || || ||| || || || || ||||| || Sbjct 613517 TCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 613576 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||| ||||| || || ||||| || ||||| ||||| || | | Sbjct 613577 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTA 613636 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| |||| ||||| || | || | || |||||||| || || || ||| Sbjct 613637 TCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACA 613696 Query 114372 AAAATCTGCATGGC 114385 || |||||||| || Sbjct 613697 AAGATCTGCATTGC 613710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131665712808