Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq524 165 2e-35 seq57 143 6e-29 seq124 104 6e-17 seq346 100 7e-16 seq101 100 7e-16 seq379 98.7 2e-15 >seq524 Length=649165 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||| | |||||| || || |||||||| ||||||| |||||||| ||||| || | | Sbjct 612710 AGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGAGT 612769 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || ||||| || |||||||| || ||||||||||| || ||||||||| Sbjct 612770 TGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGATT 612829 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || ||||| || || | |||| || || || ||||||||||| ||||| || Sbjct 612830 TTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGCCA 612889 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || ||||| Sbjct 612890 GTAAGCGTCTTGACGAAAATTTGCAT 612915 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||| | |||||| || || ||||| || || || | ||||||||| || || || | Sbjct 613500 CGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGA 613559 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || || |||||||| ||||| || ||||| || || || ||||||| Sbjct 613560 GCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGA 613619 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || || || || || | ||||| || || || ||||||||||| ||||| | Sbjct 613620 TCTTGGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGC 613679 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCATT 288474 |||| || |||||||| || ||||||||| Sbjct 613680 CGGTGAGGGTCTTGACAAAGATCTGCATT 613708 Score = 136 bits (150), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || || | |||| || || |||||||| || | Sbjct 612913 CATG-CCACCACGCAGGCGCAGAACAAGGTGCAGCGTGGACTCCTTCTGGATATTGTAAT 612971 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||||| || ||||| || | ||| || || ||||| |||| ||||| || Sbjct 612972 CGGACAGCGTCCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCGG 613031 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || ||||||||||||||||| || ||||| || || | || || | Sbjct 613032 GCGGGATCCCCTCCTTATCCTGGATTTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACT 613091 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || ||||| ||||||||||||| |||||||| || |||||||| Sbjct 613092 CGACTTCCAGGGTGATGGTCTTCCCGGTCAACGTCTTGACAAAGATCTGCAT 613143 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| || | |||||| || || || || || ||||||| ||| ||||| ||||| |||| Sbjct 613215 CGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTA 613274 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || ||||||||||||||||| || ||||| || || || ||||||| Sbjct 613275 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGA 613334 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || || || || |||| || || || || || || ||||||||||| | Sbjct 613335 TCTTGGCCTTGACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGC 613394 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| ||||| ||||| |||||||| Sbjct 613395 CCGTCAGCGTCTTCACGAAGATCTGCAT 613422 >seq57 Length=599116 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | |||| || || ||||| || || || | || ||||| ||||| Sbjct 467465 AGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 467524 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || || || || |||||||| || ||||| || ||||| || || |||||| Sbjct 467525 TCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 467584 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| || ||||| || || | ||| ||| || ||||| | |||||||||| Sbjct 467585 TGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATCGTC 467644 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| |||||||| Sbjct 467645 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| |||||||| | || || || ||||| || || | Sbjct 467674 CATG-CCGCCGCGCAGACGAAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAAT 467732 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || ||||| || || || | || || || || ||||| || ||||| || | Sbjct 467733 CCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAG 467792 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| || || || || |||||||| |||||||| ||||| || || | ||| ||| | Sbjct 467793 GTGGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACT 467852 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || |||||||||||||| ||||| || ||||| |||||||| ||||| Sbjct 467853 CGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| | || ||||| |||||||| | || || || ||||| Sbjct 467999 TCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAA 468058 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||||| ||| ||||| || |||||||| ||||| |||||| Sbjct 468059 ATGAGGCGCTGCTGG---TCTGGCGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACG 468115 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || |||||||| ||||| || ||||| |||||| Sbjct 468116 TTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGTGTCTTG 468175 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 468176 ACGAAGATTTGCAT 468189 >seq124 Length=448922 Score = 104 bits (114), Expect = 6e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| | | || ||||| || || ||||| ||||| || || || || || Sbjct 289246 ATCGGCATGAACTCGAAGCTGATGAACCAGTACATCGAGTTCGTCGCGGACCGCCTCCTC 289305 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 |||||||| | ||||| ||||| ||| ||||||||||| ||| ||||| | Sbjct 289306 GTCGCACTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGACATG 289365 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || ||||| | || ||||||||||||||||| ||||| || |||||| Sbjct 289366 ATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGACTA 289415 >seq346 Length=295572 Score = 100 bits (110), Expect = 7e-16 Identities = 184/270 (68%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 325441 ||||| | | ||||| |||||| ||||| || ||||||| || | ||| ||||||||| Sbjct 69281 GGCAAGAGCAGGTTGACGTTATTACTTCCTACGAAATCCTGGGCCAAGTTGACGATGGTC 69340 Query 325442 CCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAAC 325501 || ||||||||| ||||||||||| || || | | ||||| || | Sbjct 69341 ATGCCCAAGCTTGCTTCGCCGTGGTGATAGGCAGCGTGTTCGGAGATATAACCAACGAGC 69400 Query 325502 TGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGT 325561 || || ||||| | || | | | ||||||||||| || |||| || || ||| Sbjct 69401 TGGGCGACCTTGATCTCTCCCTTGAGCTTGCGCTTGAAGCAAGACCATATGACCTTGCGT 69460 Query 325562 TGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAG 325621 ||| || || | || || ||| | ||||||||| ||| | ||| | ||| Sbjct 69461 TGACCGGGCTTCAGCCCGTCGACGGCGGACGGAATGGATCGAACATTGTCGGCTTGGGAG 69520 Query 325622 AACAAAATAAGTTCCTTGTCGATGAAGTCG 325651 ||||| || || ||||||| |||||||||| Sbjct 69521 AACAAGATTAGCTCCTTGTTGATGAAGTCG 69550 >seq101 Length=461416 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| | | | ||||| || |||||||| ||||| || || || | || Sbjct 404064 ATCGGCATGAACTCGAAATTGATGAACCAGTATATCGAGTTCGTCGCCGACCGCCTGCTC 404123 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || ||||| | ||||| ||||| ||| ||||||||||| ||| ||||| | Sbjct 404124 GTCGCGCTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGACATG 404183 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || ||||| | || ||||||||||||||||| ||||| ||| |||||| Sbjct 404184 ATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCCGACTA 404233 >seq379 Length=286460 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || || || || || | |||||||| || || ||| Sbjct 273005 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTCGACTCGACCTCG 272946 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| || |||||||||||||| || |||||||| Sbjct 272945 AGCGTGATGGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 272902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646328952052