Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq101 118 2e-21 seq124 111 3e-19 seq346 100 6e-16 >seq101 Length=461416 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| |||| ||| | |||||| | || | | Sbjct 404001 ATCATCACGGAGGCCGTGAAGATCGAGCAGGAGTTCCTCACCGACGCGCTCCCCGTCTCG 404060 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||||| || | ||| ||||| ||||| ||||| ||||||||| | Sbjct 404061 CTCATCGGCATGAACTCGAAATTGATGAACCAGTATATCGAGTTCGTCGCCGACCGCCTG 404120 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || ||||||| || | ||||| |||||||| ||| ||||| | ||| ||||| Sbjct 404121 CTCGTCGCGCTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGAC 404180 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 | || ||||| || || || || ||||||||||| ||||| ||| Sbjct 404181 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTC 404225 >seq124 Length=448922 Score = 111 bits (122), Expect = 3e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||||||||| || | | ||| |||| ||| | ||||| | || | Sbjct 289183 ATCATCACAGAAGCTGTGAAGATCGAGCAGGAGTTCCTCACGGACGCGCTCCCCGTCTCC 289242 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||||| | || ||| ||||||||||| ||||| || |||||| | Sbjct 289243 CTCATCGGCATGAACTCGAAGCTGATGAACCAGTACATCGAGTTCGTCGCGGACCGCCTC 289302 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | ||||| |||||||| ||| ||||| | ||| ||||| Sbjct 289303 CTCGTCGCACTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGAC 289362 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| || || || || ||||||||||| ||||| || Sbjct 289363 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGT 289406 >seq346 Length=295572 Score = 100 bits (110), Expect = 6e-16 Identities = 184/270 (68%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 297503 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 297562 ||||| | | ||||| |||||| ||||| || ||||||| || | ||| ||||||||| Sbjct 69281 GGCAAGAGCAGGTTGACGTTATTACTTCCTACGAAATCCTGGGCCAAGTTGACGATGGTC 69340 Query 297563 CCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAAC 297622 || ||||||||| ||||||||||| || || | | ||||| || | Sbjct 69341 ATGCCCAAGCTTGCTTCGCCGTGGTGATAGGCAGCGTGTTCGGAGATATAACCAACGAGC 69400 Query 297623 TGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGT 297682 || || ||||| | || | | | ||||||||||| || |||| || || ||| Sbjct 69401 TGGGCGACCTTGATCTCTCCCTTGAGCTTGCGCTTGAAGCAAGACCATATGACCTTGCGT 69460 Query 297683 TGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAG 297742 ||| || || | || || ||| | ||||||||| ||| | ||| | ||| Sbjct 69461 TGACCGGGCTTCAGCCCGTCGACGGCGGACGGAATGGATCGAACATTGTCGGCTTGGGAG 69520 Query 297743 AACAAAATAAGTTCCTTGTCGATGAAGTCG 297772 ||||| || || ||||||| |||||||||| Sbjct 69521 AACAAGATTAGCTCCTTGTTGATGAAGTCG 69550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872454232900