Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq379 114 2e-20 seq124 89.7 6e-13 >seq379 Length=286460 Score = 114 bits (126), Expect = 2e-20 Identities = 433/673 (64%), Gaps = 15/673 (2%) Strand=Plus/Minus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | ||| || || || | || | || |||||| || | | Sbjct 265204 GCGTCCTTGTACAGCATGAACGGCCCACCGGTTTCGATCTGCGCCTCGAGAATGGCGTAC 265145 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCTCCTCCTCGTACTTTGT 114705 || | | || ||| | || || | || || || ||||||| |||||| | Sbjct 265144 CACAGCTTCTGCGCCGGGA----TGACCTTCCGCGCGCGACCCTCCTTCTCGTAGCGTTC 265089 Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765 ||||| || |||||||| | | |||| || || ||||||| | ||||| Sbjct 265088 ATAGAGCGCCTCAAACTCGGCGCTGTGCACCTCGTGCAGACCCGGTGCCTCGTTCGGGCA 265029 Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 ||||| ||||| | | | |||| || ||||||||||| ||||| || |||||||| Sbjct 265028 GAAGAACGACCAATCCGCGTTCGCCTCGACGCGCTTCATGAATAGGTCGGGAATCCAGAG 264969 Query 114826 AGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 114885 || |||| || ||||| ||| | ||||| | || || || |||| || | Sbjct 264968 CGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGAG 264909 Query 114886 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG--- 114942 || || | ||| |||| ||||||||| || ||||| | || | | ||| || Sbjct 264908 GAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTAGATGGCAAACGCGCCCGGGCGCTT 264849 Query 114943 ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGAT 115002 || | |||| || || | ||| || | || || |||| ||||| || | || Sbjct 264848 GTTGCCGCCTTGGTCCACGTAGCGCGCCGTCGAATCGAACGCGCGCAGCATGGGCACGAG 264789 Query 115003 ACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGG 115060 || | || ||| || || ||| ||| |||||| | ||||| | || | || Sbjct 264788 CCCGTTCGACACGCCGTTCGTGCCCGCGATGTACGAGCC--CTTGGCGCGGATGTTGTGA 264731 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 |||| | |||||||| || || | ||| ||| |||||| || |||| || || Sbjct 264730 ATGTTAAGGCCAATACCGCCCGCACTCTTGCTGATCATGGCGCACGCCTTGAGCGTGTCG 264671 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 ||||| || ||||| ||| |||| | || | | ||| ||||| || || || Sbjct 264670 TAGATGCCTTCGATACTGTCGTCCTTCATGGCCACCAAGAAACAGCTGCTCAGCTGCGGG 264611 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 115240 | || || || ||| ||| || || |||| |||||| |||| | || ||||||| Sbjct 264610 CGCGGGGTCCCCGCGGCGAATAGTGTCGGTGACGCGTGCGTGAAGTAGCGTTCGGACATC 264551 Query 115241 TTATCGTAGGTCT 115253 | ||| |||| Sbjct 264550 AGGTTGTAAGTCT 264538 Score = 82.4 bits (90), Expect = 9e-11 Identities = 331/512 (65%), Gaps = 11/512 (2%) Strand=Plus/Plus Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || || || |||||||| || ||||||| || || ||| | || || | || Sbjct 219912 AAAAGATCGGGAATCCAGAGCGCATAGAAGAGGTCGCGCGCGCGGACCTCCTCTTTGCCG 219971 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || |||| || | ||||| | | ||||| |||||||| || | ||| | | Sbjct 219972 TGGTTCTTGCGCAGGTCGAGGAAGTCGAACACGTCCGCATGCCACGGCTCGATGTAAATC 220031 Query 114926 GCGATTGACCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 |||| | || ||| ||| |||||| ||||| | ||| || | | | Sbjct 220032 GCGAACGCGCCGGGACGCTTGTTACCGCCCTGGTCGACATAGCGCGCCGTCGAGTCGTAC 220091 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC-CGAA-TACGAGACT 115040 |||| ||||| || | ||| || | ||||| || || ||| ||| |||||| | Sbjct 220092 GCGCGCAGCATGGGCACGATGCCGTTGCTGTGGCCGTTCGTGCCCGCGATGTACGAGCCC 220151 Query 115041 TATTGGCTCTGACATCA-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | || | || || ||||||| | || || || || ||| ||| ||| | Sbjct 220152 T--TCGCGC-GAATGCAGTGGATGTTGAGGCCGATGCCGCCGGCCGTCTTGCTGATCATC 220208 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 |||||| | |||| || ||||||| || ||||||||||| |||| | | || |||| Sbjct 220209 GCGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATCGTGACAAGG 220268 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 |||||||| || || || || || || ||||||||||| || || | ||||| Sbjct 220269 AAGCAGCTGCTCAGCTGCGGATGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAAGCGTGC 220328 Query 115220 ATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCC 115278 |||| | | ||||||| | ||| ||||| | || || | | ||| | || Sbjct 220329 GTGAAGTAGCGCTCGGACATCAGGTTGTACGTCTCGATCGCGCGCTCG-ACGTCCGCGCC 220387 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGT 115310 ||| || || | || || ||||| | ||||| Sbjct 220388 GTGGATGCCCACCGCCACGCGCATGAGCATGT 220419 >seq124 Length=448922 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 8796 GGGAACCTCAACGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGG 8855 || |||||| |||| || | |||||||| |||||||||||||| ||||| | ||||||| Sbjct 102256 GGCAACCTCGACGCGAAGCGCGACTGGGGCCACGCCAAGGACTACGTTGAGGGCATGTGG 102197 Query 8856 CTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCC 8915 | | | || || || || || || || | |||| | || || || ||||| ||| || Sbjct 102196 CGCATGCTCCAGCAGGACACCGCCGAGGACTTTGTCCTTGCCACCGGCGAGACCCACCCC 102137 Query 8916 GTCAGGGAGTTCGTTGA 8932 ||| | ||||| || || Sbjct 102136 GTCCGCGAGTTTGTCGA 102120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349612664720