Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq379 212 6e-50 seq48 156 4e-33 >seq379 Length=286460 Score = 212 bits (234), Expect = 6e-50 Identities = 600/906 (66%), Gaps = 38/906 (4%) Strand=Plus/Minus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| Sbjct 219589 GCCAAGTCCAACCAGCAGAACCTCGGCACGATCAAGTCGTCGAACCTGTGCACCGAGATC 219530 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCC 94647 || ||||| || | |||||||| | || ||||| ||||||| ||| || ||| | Sbjct 219529 GTTGAGTACTCTGCGCCGGACGAAGTGGCCGTGTGCAACCTGGCCTCAATTGCGCTGCCG 219470 Query 94648 ACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAAC 94707 | |||||| ||| ||| | |||| ||| | || |||| || Sbjct 219469 TCCTTCGTG---ACCGCCGACAAG------AAATCGTACGACTTCCAGAAGCTGCACGAC 219419 Query 94708 TTCGCGGGAAGGATGGTC---TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCC 94764 |||| |||| | ||| |||||||||| | | |||||| ||||| ||||||| Sbjct 219418 GTCGC--CAAGG-TCGTCGCACGCAACCTGAACAAGATCATCGACGTGAACTACTACCCC 219362 Query 94765 GTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGT 94824 || || |||||| | ||| || || |||||||||||||||||||| ||||| Sbjct 219361 GTGCCCGAGGCGCGCCGCAGCAACATGCGCCACCGGCCCATCGGCATCGGCGTGCAGGGC 219302 Query 94825 TTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCG-GCGGGTTT 94883 ||||||||||| | |||| |||| ||||| | |||| || ||| || | | Sbjct 219301 CTCGCGGACGCGTTCATGATCCTGCGCCTGCCGTTCGACAGCCCGGAGGCGCGCAAG-CT 219243 Query 94884 GAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC 94943 || | | || ||||| | ||| || ||| || | | | |||| || || Sbjct 219242 CAACCTCCAGATCTTCGAGACCATCTACCACGCCGCGCT----CGAGGCGTCGTCTGAGC 219187 Query 94944 ---CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCAT 95000 | || || || || || |||| ||| ||| ||||| | | ||||||| Sbjct 219186 TCGCCGAGCG--CGAGGGCCCGTACGAGACGTGGGTCGGCTCGCCTGCGCAGCAGGGCAG 219129 Query 95001 TTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTA 95058 | |||| |||||| ||||| || | ||| ||| |||| |||||| || ||| | Sbjct 219128 GCTGCAGTACGACCTGTGGGGCGTCACGCCGACGGACCTGTGGGACTGGGCGAGCCTCAA 219069 Query 95059 CGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACG 95118 | || ||| | ||| || || ||| ||||| | |||| || ||||| ||| Sbjct 219068 GGAGCAGAT-CGCGCGCACA-GGCCTGCGCAACTCGCTGTTGCTGGCGCCGATGCCGACG 219011 Query 95119 GCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTG 95178 || || ||| |||||||| ||| |||||||| ||||| || | ||| |||| | Sbjct 219010 GCGTCGACGAGCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCGTACACGAGCAACATC 218951 Query 95179 TACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGAC 95238 |||| | || |||||||| || || |||| || | | | || || || || Sbjct 218950 TACACGCGCCGCGTGCTCGCGGGCGAGTTCCAGGTGGTGTGCCCGTGGCTGCTGCGCGAG 218891 Query 95239 CT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA--- 95294 || | || | | | |||||| ||| | | |||||| || | |||||| Sbjct 218890 CTCGTCGAC-CGCCGGCTGTGGGACGACCACATGAAGAAC---CTCATCATCGCCAACGG 218835 Query 95295 CGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGT 95354 |||||| || ||||||||||| || || || ||| ||||||| ||||||||||||| Sbjct 218834 CGGCTCGGTGCAGAACATCCCCGGCATCCCCGACGACGTCAAGGCCATCTACAAGACCGT 218775 Query 95355 GTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTG 95414 ||||||||| ||||| | | |||||| || || | |||||| | ||||| || Sbjct 218774 CTGGGAGATCTCGCAGAAGAAGGTGCTCGACATGGCTGCGGACCGCGGCGCGTTCATTTG 218715 Query 95415 CCAGAG 95420 |||||| Sbjct 218714 CCAGAG 218709 Score = 176 bits (194), Expect = 4e-39 Identities = 591/907 (65%), Gaps = 46/907 (5%) Strand=Plus/Plus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||| ||||||||| ||||||| ||||||| || || || ||||||||||| Sbjct 265258 GCCAAGTCGAACCAGCAGAACCTCGGCACGATCAAGTCGTCCAACCTCTGCACCGAGATC 265317 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCC 94647 ||||||| | || || || || || || || || ||||||| |||||| || | Sbjct 265318 ATCGAGTACTCCTCGCCCGATGAAATCGCCGTTTGCAACCTGGCGTCCATCGCTCTACCG 265377 Query 94648 ACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAAC 94707 || || | || || || || | || | | | || |||| || Sbjct 265378 ACGTTTAT---------CTCCA-----ACGGCGT-GTACAACTTTCAGAAGCTGCACGAC 265422 Query 94708 TTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTC 94767 ||||| || | | || |||||||||||| | |||||| ||||| |||||||||| Sbjct 265423 ATCGCGAAAATCGTTGCGTTCAACCTGAACAGGATCATCGACGTGAACTACTACCCCGTC 265482 Query 94768 CCGGAGGCGGA---GAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGT 94824 || |||||| || | ||| || || |||||||| ||| ||||||| ||||| Sbjct 265483 CCCGAGGCGCGCCGGAGC---AACATGCGCCACCGGCCCATTGGCGTCGGCGTGCAGGGC 265539 Query 94825 TTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCG-GCGGGTTT 94883 ||||||||| | || | | || ||||||| ||| | || ||| || | | Sbjct 265540 CTCGCGGACGTCTTCATGGCGCTACGCCTGCCCTTCGAGAGCGCGGAGGCGCGCAAGCTC 265599 Query 94884 GAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC 94943 || | | || ||||| | ||| || ||| || | | | || || || Sbjct 265600 -AACCAGCAGATCTTCGAGACCATCTACCACGCTGCGCT----CGAGGCGAGCA----GC 265650 Query 94944 CAGATCG----GACGGC-GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGC 94998 |||| | ||||| ||||| |||| ||| || |||||| | | |||||| Sbjct 265651 GAGATGGCGGCGACGGATGGGCCCTACGAGACGTGGGTGGGCTCGCCCGCGCAGCAGGGC 265710 Query 94999 ATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCT 95057 | | |||| |||||| |||||||| | |||| | | || | ||||||| ||| || Sbjct 265711 AAGCTGCAGTACGACCTGTGGGGTGTCACGCCCACCGACCTCTGGGACTGGGCGAGC-CT 265769 Query 95058 ACGCGCTGATGTTATCAAACAC-GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCA 95116 | | || | | | ||| ||| || ||| |||| || | || |||||||| | Sbjct 265770 -CAAGGAGAAGATCGCGCGCACAGGTCTGCGCAACTCGCTCCTGCTCGCGCCCATGCCGA 265828 Query 95117 CGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACG 95176 | || ||| |||||||| ||| |||||||| ||||| || | ||| |||| Sbjct 265829 CCGCGGGGACGAGCCAGATCCTGGGCTTCAACGAGTGCTTCGAGCCGTACACGAGCAACA 265888 Query 95177 TGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGG 95236 | |||| | || || ||||| || || |||| || || | | | || || Sbjct 265889 TCTACACGCGCCGCGTCCTCGCGGGCGAGTTCCAGATCGTCTGCCCGTGGTTGCTCAAGG 265948 Query 95237 ACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACG 95296 | ||| | || || |||||| ||| | | |||||| || | ||||||| Sbjct 265949 AACTGGTCGCGCTTGGGCTGTGGGACGACCACATGAAGAACA---TGATCATTGCCAACG 266005 Query 95297 GC---TCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCG 95353 || || || ||||| |||||| | || ||||| ||| ||||||| |||||||||| | Sbjct 266006 GCGGCTCGGTTCAGAATATCCCGAACATCCCGGACGACGTCAAGGCCATCTACAAGACAG 266065 Query 95354 TGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCT 95413 ||||||||||| ||||| | | || |||| ||| || | |||||| | ||||||| Sbjct 266066 TGTGGGAGATCTCGCAGAAGAAGGTCCTTGACCTCGCAGCTGACCGCGGCGCGTTCATCT 266125 Query 95414 GCCAGAG 95420 ||||||| Sbjct 266126 GCCAGAG 266132 Score = 159 bits (176), Expect = 3e-34 Identities = 289/423 (68%), Gaps = 0/423 (0%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 ||||| || ||| ||||||||||||| || ||| || |||||| || || | Sbjct 264582 CCGACACTATTCGCCGCGGGGACCCCGCGCCCGCAGCTGAGCAGCTGTTTCTTGGTGGCC 264641 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||| ||| || || | ||||| ||||||| || || | ||| Sbjct 264642 ATGAAGGACGACAGTATCGAAGGCATCTACGACACGCTCAAGGCGTGCGCCATGATCAGC 264701 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||||| || || || | | | ||| || | || |||| ||| || |||||| Sbjct 264702 AAGAGTGCGGGCGGTATTGGCCTTAACATTCACAACATCCGCGCCAAGGGCTCGTACATC 264761 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 || || || ||| || ||||| ||||| || ||||| || | ||| | || Sbjct 264762 GCGGGCACGAACGGCGTGTCGAACGGGCTCGTGCCCATGCTGCGCGCGTTCGATTCGACG 264821 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 ||||||||||||||||| || || | | | ||| | || || |||| |||||| Sbjct 264822 GCGCGCTACGTGGACCAAGGCGGCAACAAGCGCCCGGGCGCGTTTGCCATCTACCTCGAG 264881 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| ||||| | | ||| |||||||||| |||||||||||||| || | Sbjct 264882 CCGTGGCACCCGGACATCTTCGAATTCCTCGACCTGCGCAAGAACCACGGCAAGGAAGAG 264941 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | ||||| |||||||| |||||| | || ||||| || ||||| |||||| Sbjct 264942 GTCCGCGCGCGGGACCTGTTCTACGCGCTCTGGATTCCCGACCTATTCATGAAGCGCGTC 265001 Query 94318 GAG 94320 ||| Sbjct 265002 GAG 265004 Score = 154 bits (170), Expect = 1e-32 Identities = 393/596 (66%), Gaps = 18/596 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||| | |||||| || || ||| ||||| ||||| ||| | ||| | Sbjct 220498 TACCAATACTTCGGCTTCAAGACGCTCGAGCGCTCGTATCTCCTGCGGATTAACGGCCGC 220439 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 ||| ||||||| ||||| || |||| |||||||| || | || || |||||| ||| Sbjct 220438 GTTGCCGAGCGGCCGCAGCACATGCTCATGCGCGTGGCGGTGGGCATCCACGGCGCGGAC 220379 Query 93838 ATGCCGAATGTTTTGCGGGCTTTC-AGAG-----ACATGCGGGACAAGAGGTATACCATG 93891 | ||| ||| || || ||| || || | | || | || || | Sbjct 220378 GT--CGA-------GCGCGCGATCGAGACGTACAACCTGATGTCCGAGCGCTACTTCACG 220328 Query 93892 ---GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTC 93948 || | ||||| || |||||||| || || ||| || ||| || || ||| Sbjct 220327 CACGCTTCGCCGACGCTCTTCAACGCCGGCACGCCGCATCCGCAGCTGAGCAGCTGCTTC 220268 Query 93949 CTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCG 94008 || | |||| |||| ||||| ||| || || | ||||| |||||| || ||| Sbjct 220267 CTTGTCACGATGAAGGAGGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCG 220208 Query 94009 ACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGT 94068 | ||| || || || || ||||| ||| ||||| | | || || | ||| Sbjct 220207 ATGATCAGCAAGACGGCCGGCGGCATCGGCCTCAACATCCACTGCATTCGCGCGAAGGGC 220148 Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || |||||| || || || ||| | ||||||| |||| || ||||| || | | | Sbjct 220147 TCGTACATCGCGGGCACGAACGGCCACAGCAACGGCATCGTGCCCATGCTGCGCGCGTAC 220088 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || |||||||||| || |||||||| ||| | | | || | |||||| | Sbjct 220087 GACTCGACGGCGCGCTATGTCGACCAGGGCGGTAACAAGCGTCCCGGCGCGTTCGCGATT 220028 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || ||||||| ||||| ||||||||| | ||| |||||||||| |||||||||||| Sbjct 220027 TACATCGAGCCGTGGCATGCGGACGTGTTCGACTTCCTCGACCTGCGCAAGAACCACGGC 219968 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || | || | ||||||||||| || |||||| | || || ||||| Sbjct 219967 AAAGAGGAGGTCCGCGCGCGCGACCTCTTCTATGCGCTCTGGATTCCCGATCTTTT 219912 >seq48 Length=83013 Score = 156 bits (172), Expect = 4e-33 Identities = 241/340 (71%), Gaps = 17/340 (5%) Strand=Plus/Plus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| Sbjct 60396 GCCAAGTCCAACCAGCAGAACCTCGGCACGATCAAGTCGTCGAACCTGTGCACCGAGATC 60455 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCC 94647 || || || || | ||||||||| | || ||||| ||| ||| || ||| ||| | Sbjct 60456 GTTGACTACTCTGCGCCGGACGAGGTCGCGGTGTGCAACTTGGCATCGATCGCGCTGCCG 60515 Query 94648 ACTTTCGTG-CGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAA 94706 | |||||| || ||| ||| | |||| ||| | || |||| | Sbjct 60516 TCGTTCGTGACG----GCCGACAAGAAA------TCGTACGACTTCCAGAAGCTGCACGA 60565 Query 94707 CTTCGCGGGAAGGATGGTCTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCC 94763 | |||| |||| | ||| | |||||||||| | | |||||| ||||| |||||| Sbjct 60566 CGTCGCC--AAGG-TCGTCGCGCGCAACCTGAACAAGATCATCGACGTGAACTACTACCC 60622 Query 94764 CGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGG 94823 ||| || |||||| | ||| || || |||||||||||||||||||| ||||| Sbjct 60623 CGTGCCCGAGGCGCGCCGCAGCAACATGCGCCACCGGCCCATCGGCATCGGCGTGCAGGG 60682 Query 94824 TTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGAC 94863 | ||||||||||| | |||| |||| ||||| | |||| Sbjct 60683 TCTCGCGGACGCGTTCATGATCCTGCGCCTGCCGTTCGAC 60722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719897722640