Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq124 152 8e-32 seq101 138 2e-27 seq379 107 3e-18 >seq124 Length=448922 Score = 152 bits (168), Expect = 8e-32 Identities = 356/533 (67%), Gaps = 17/533 (3%) Strand=Plus/Minus Query 159641 GACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCG 159700 ||||| ||||||||| ||||| |||||||||| || || || |||||||| || Sbjct 289409 GACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATGAAGTCG 289350 Query 159701 AATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCC 159760 || || ||| | || ||| ||||| ||||| || | || | | ||| || Sbjct 289349 AAGGGATTCGACGAGTTGTAGTGCTTCTCGTTGCCGAGTGCGACGAGGAGGCGGTCCGCG 289290 Query 159761 ACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGC 159820 || || |||||||| |||| ||| |||| || || | || ||||||||| Sbjct 289289 ACGAACTCGATGTACTGGTTCATCAGCTTCGAGTTCATGCCGATGAGGGAGACGGGGAGC 289230 Query 159821 GCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC-TGCGAGACACG 159879 || |||| || ||||||| ||| |||| || ||||| || | ||| |||| ||| Sbjct 289229 GCGTCCGTGAGGAACTCCTGCTCGATCTTCACAGCTTCTGTGATGATCATGCG-GACGGT 289171 Query 159880 TTCGTACCCCGG---CTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCA 159936 ||| || ||||| | ||| | || || ||||||||||||||| Sbjct 289170 GTCGGGATGTGGGCGCTTGCGGA------GGTGCGAGAAGAGCAGGCACGCAAAGTCGGT 289117 Query 159937 GTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCC 159996 ||||| |||||||| || ||||||| ||||||||| | | ||||| ||||||| || Sbjct 289116 GTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTCAGGCCGGGCATGAGGCC 289057 Query 159997 ACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGC 160056 ||| |||||||| || ||| ||| || | ||||| || || || || || ||||| Sbjct 289056 TCGCTTCTTGAGCCAGAAGATGCTCGCGAAGGAGCCGCTGAAGAAAATGCCTTCAACGGC 288997 Query 160057 CGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGC 160116 || || || | ||| | ||| || || | | || |||| | |||| | || Sbjct 288996 GGCGAAGGCAATGAGGCGCTCGCCGAATGTCGAGTCCTTGTCCGAGATCCAGCGCAGTGC 288937 Query 160117 CCATTCAGCCTT---CTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA 160166 ||| || ||||| ||| |||||| || || ||||| ||||| ||||| Sbjct 288936 CCACTCGGCCTTGCGCTT---GATGCATGGGATAGTCTCGATGGCGTCAAACA 288887 >seq101 Length=461416 Score = 138 bits (152), Expect = 2e-27 Identities = 343/516 (66%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||| |||||||||| || || || |||||||| |||| || || Sbjct 404219 CTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATGAAGTCGAAGGGATT 404160 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | || ||| ||||| ||||| || | |||| | ||| || || || || Sbjct 404159 CGACGAGTTGTAGTGCTTCTCGTTGCCGAGCGCGACGAGCAGGCGGTCGGCGACGAACTC 404100 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||| || |||| | |||| || || | ||| ||||||||||| || | Sbjct 404099 GATATACTGGTTCATCAATTTCGAGTTCATGCCGATGAGCGAGACGGGGAGCGCGTCGGT 404040 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC-TGCGAGACACGTTCGTACC 159887 || ||||||| ||| |||| || || || || | ||| |||| ||| ||| Sbjct 404039 GAGGAACTCCTGCTCGATCTTCACGGCCTCCGTGATGATCGTGCG-GACGGTGTCGGGGT 403981 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || | | ||| | || || | ||| || |||||| ||||| || Sbjct 403980 GCGGGCGTTTGCGGAGATGCGAG-----AAGAGCAAGCAGGCGAAGTCGGTGTGCATGCC 403926 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||||| ||||||||| | | ||||||||||||| | || ||| || Sbjct 403925 CTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATCAGGCCGCGCTTCTT 403866 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| ||| || | ||||| || || || ||||| ||||| || || || Sbjct 403865 GAGCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAAATGCCCTCGACGGCGGCGAAGGC 403806 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | ||| | ||| || |||| | || |||| |||| | ||||| || || Sbjct 403805 GATGAGGCGCTCGCCGAAAGTCGAGTCCTTGTCGGATATCCAGCGCAGCGCCCACTCGGC 403746 Query 160126 CTT---CTTTGCGATGCACGGCATGCGCTCGACGGC 160158 ||| ||| ||||||||| ||| ||||| ||| Sbjct 403745 CTTGCGCTT---GATGCACGGGATGGTCTCGATGGC 403713 >seq379 Length=286460 Score = 107 bits (118), Expect = 3e-18 Identities = 243/363 (67%), Gaps = 2/363 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || |||||| ||||| || |||| ||||| || || || | | | || Sbjct 264995 CTTCATGAATAGGTCGGGAATCCAGAGCGCGTAGAACAGGTCCCGCGCGCGGACCTCTTC 264936 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| || ||| || || || | ||||| | |||||||||||| | Sbjct 264935 CTTGCCGTGGTTCTTGCGCAGGTCGAGG-AATTCGAAGATGTCCGGGTGCCACGGCTCGA 264877 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | ||| | ||||| || | |||||| || || |||||||| ||| | | ||| Sbjct 264876 GGTAGATGGCAAACGCGCCCGGGCGCTTGTTGCCGCCTTGGTCCACGTAGCGCGCCGTCG 264817 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 | ||| | |||||||| ||||| || ||||| | |||||||||| |||| Sbjct 264816 AATCGAACGCGCGCAGCATGGGCACGAGCCCGTTCGACACGCCGTTCGTGCCCGCGATGT 264757 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 |||||| | || | | |||| ||| |||||| ||||| | || |||| || Sbjct 264756 ACGAGCCCTTGGCGCGGATGTTGTGAATGTTAAGGCCAATACCGCCCGCACTCTTGCTGA 264697 Query 205464 TCTGGGCGCACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523 || ||||||| | | || ||| |||||||||| |||| |||||| || | || Sbjct 264696 TCATGGCGCACGCCTTGAGCGTGTCGTAGATGCCTTCGATACTGTCGTCCTTCATGGCCA 264637 Query 205524 CCA 205526 ||| Sbjct 264636 CCA 264634 Score = 89.7 bits (98), Expect = 8e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 203842 GTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGT 203901 ||| ||||||||||||||||| | | | || || | | | ||| |||||||||||||| Sbjct 266330 GTCGACCGTGAACTGAATGGCCTGCGCTGCCGGGCGCGTGCGCAGGTAGTACATGCCGGT 266271 Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATG 203935 ||| |||||||||| ||| ||||| | ||||||| Sbjct 266270 CTTGAGGCCCTTCTTCCATCCGTAGAAGTGCATG 266237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149892339040