Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq443 163 4e-35 seq46 87.8 2e-12 >seq443 Length=755634 Score = 163 bits (180), Expect = 4e-35 Identities = 324/478 (68%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||||||||| ||||| |||||| | | |||| || |||| |||| | ||| || Sbjct 402750 TCCTCAAAACGAGCACGAGTAATGTTCGCAGAGAAGTCCTCGCCTCCGTACAGCGAGTCG 402809 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | |||| || || || | ||| | || ||||| || ||||| || || | Sbjct 402810 ACCTCAACCGTGGTCTGGGGAACGCTAGAGAGGGTGCGCTTGGCACGCTCGCAAGCGCTG 402869 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | |||||| || ||||| |||| | || || || | ||| || || || ||| Sbjct 402870 CGCAGACGACGGAGCGCACGAGGGTCGTCAGAGATGTCGTGCTTGGTCTTGCGCTTGAAC 402929 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | |||||| ||| || | ||||| || |||||||| | || || || Sbjct 402930 TCGTTCTTGAAGTGCTCAAGCAGGGTGTTGTCGAAGTCCTCACCACCGAGATGGGTGTCG 402989 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| || ||||| | |||| ||| || ||| | | | || ||||| || Sbjct 402990 CCGGCGGTGGCCTTGACGGCGAAGACACCACCGGTGATGCTGAGTAGGGACACATCGAAA 403049 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTCTTATCGA 7604 ||||||||||| || || || ||||| ||| | | || | |||| | | || | Sbjct 403050 GTACCACCACCGAGATCGAAGATGAGGACGACCTTCTCCT--TCTTGGACTGGCGGTCAA 403107 Query 7605 GACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAG 7664 ||||||| || ||||| |||||||| || || || || ||||| ||| || ||||||| Sbjct 403108 GACCGTAGGCAATAGCGGCCGCCGTGGGCTCGTTGATGATACGGAGAACGTCAAGGCCAG 403167 Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||| | | ||||| || ||||| | ||||| || ||||| ||||| || ||||| Sbjct 403168 CAATGGCACCTGCATCCTTGGTCGCAAGACGTTGGGAGTCGTTGAAGTACGCGGGGAC 403225 >seq46 Length=603006 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAG 7659 || |||||||| |||| ||||||||||| || || ||| | ||| ||||| || || Sbjct 457846 TCAAGACCGTATGCGAGCGCCGCCGCCGTCGGCTCGGGAATGACACGCAAGAC-GTCGAG 457904 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||| || || | | || || ||||| ||||||||||| | ||||| ||||| ||||| Sbjct 457905 GCCGGCGATGGCGCCGGCGTCCTTCGTAGCTTGTCGTTGTGCGTCGTTGAAGTATGCCGG 457964 Query 7720 GACCGTTACGACCGC 7734 ||| || ||||| || Sbjct 457965 GACGGTGACGACAGC 457979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128560488560