Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq379 104 3e-17 seq101 96.9 4e-15 seq124 93.3 5e-14 >seq379 Length=286460 Score = 104 bits (114), Expect = 3e-17 Identities = 227/337 (67%), Gaps = 6/337 (2%) Strand=Plus/Plus Query 112006 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 112065 |||| || ||||| |||||| |||| ||| | || ||||| || |||| ||||| | Sbjct 264871 TCTACCTCGAGCCGTGGCACCCGGACATCTTCGAATTCCTCGACCTGCGCAAGAACCACG 264930 Query 112066 GTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125 | | || |||| || || || || |||| ||| ||||||||||| || || |||| Sbjct 264931 GCAAGGAAGAGGTCCGCGCGCGGGACCTGTTCTACGCGCTCTGGATTCCCGACCTATTCA 264990 Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185 ||||| | || |||| || | ||||||| |||| || || || ||||||| |||| Sbjct 264991 TGAAGCGCGTCGAGGCGAACGCGGATTGGTCGTTCTTCTGCCCGAACGAGGCACCGGGTC 265050 Query 112186 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTC 112245 | ||| | | | |||||||| || ||||| | |||||| | || ||| Sbjct 265051 TGCACGAGGTGCACAGCGCCGAGTTTGAGGCGCTCTATGAACGCTACGAGAAGGAGGGTC 265110 Query 112246 GGGCGACTGCGACGGT--GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 112302 | ||| || ||| || | || || | ||||| | || |||||| || | || | Sbjct 265111 GCGCG---CGGAAGGTCATCCCGGCGCAGAAGCTGTGGTACGCCATTCTCGAGGCGCAGA 265167 Query 112303 CCGAGACTGGTACACCATATATGCTTTACAAAGACGC 112339 ||| || ||| || | ||||| ||||| ||||| Sbjct 265168 TCGAAACCGGTGGGCCGTTCATGCTGTACAAGGACGC 265204 >seq101 Length=461416 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| ||| |||| || || || ||||| || |||||| || |||||| ||| | Sbjct 403794 GAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGCATTTTCTTCAGCGGCTCCTTC-GCGTC 403852 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||||||||||| || || ||||| || ||| ||||||||||||||| || Sbjct 403853 CATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCGGGCCTCACCTTCTCCAACGAGCTCAT 403912 Query 102299 CTCTCGTGACGAGGG 102313 ||| || |||||||| Sbjct 403913 CTCGCGCGACGAGGG 403927 >seq124 Length=448922 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/251 (70%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCT 102143 |||| || ||||| |||||| | || | ||||| || ||| | ||| | || ||||| Sbjct 288881 AGCACCTGTTTGACGCCATCGAGACTATCCCATGCAT-CAAGCGCAAGGCCGAGTGGGCA 288939 Query 102144 ATGAAGTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTG 102202 || ||| | | |||| | | || | || | ||||| ||| | || || || Sbjct 288940 CTGCGCTGGATCTCGGACAAGGACTCGA-CATTCGGCGAGCGCCTCATTGCCTTCGCCGC 288998 Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCT-GCGCTATTTATTGGCTCAAGAAGCGAG 102261 ||||| || || |||||| || |||||| | || || | |||||||||||||||| Sbjct 288999 CGTTGAAGGCATTTTCTTCAGCGGCTCCTTCGCGAGC-ATCTTCTGGCTCAAGAAGCGAG 289057 Query 102262 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321 | |||||||| || || |||||||||||||| ||||| || |||||||| | ||| Sbjct 289058 GCCTCATGCCCGGCCTGACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCATGCACA 289117 Query 102322 AAGAGTTTGCG 102332 || |||||| Sbjct 289118 CCGACTTTGCG 289128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738256544480