Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq101 104 3e-17 >seq101 Length=461416 Score = 104 bits (114), Expect = 3e-17 Identities = 346/526 (66%), Gaps = 13/526 (2%) Strand=Plus/Minus Query 119222 CTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATAAAGTCAAAAGGATT 119281 ||| |||||||| |||||||| || | || ||||| | ||||| ||||| || ||||| Sbjct 404219 CTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATGAAGTCGAAGGGATT 404160 Query 119282 TTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACGATCGGAGACATACT 119340 ||||| || | | |||| | | | | || || || |||| ||| ||| Sbjct 404159 CGACGAGTTGTAGTGCTTCTCGTTGCCGAGCGCGACG-AGCAGGCGGTCGGCGACGAACT 404101 Query 119341 CGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACACGGG-AGAGCATCG 119399 ||||||| | | |||| || ||| ||||| || ||||| | ||||| || || ||| Sbjct 404100 CGATATACTGGTTCATCAATTTCGAGTTCATGCCGATGAGCG-AGACGGGGAGCGCGTCG 404042 Query 119400 AGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTGAATAGTTTCTGTC 119459 || ||| | || |||||||| ||| || || | | ||| | | | | || || | Sbjct 404041 GTGAGGAACTCCTGCTCGATCTTCACGGCCTCCGTGATGATCGTGCGGACGGTGTCGG-- 403984 Query 119460 GATG-GTTTGTTTCTCAAGAGTTTA-AACAACTCTACGGCAAATTCTTGATGAAGCCCTT 119517 | || | |||| ||| | || | | ||| || || || | || | Sbjct 403983 GGTGCGGGCGTTTGCGGAGATGCGAGAAGAGCAAGCAGGCGAAGTCGGTGTGCATGCCCT 403924 Query 119518 CATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTA 119577 | || || ||||||||||| || |||| || || ||||| || || | ||||| | Sbjct 403923 CGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATCAGGCCGCGCTTCTTGA 403864 Query 119578 GCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGA 119637 |||| ||||||| || || ||||| |||||||| || |||||| |||| Sbjct 403863 GCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAAATGCCCTCGACGGCGGCGAAGGCGA 403804 Query 119638 ATAGACGCTCAGCAAAAGGTCGAG-ACTTGTCG---AACCACTTGAGAGCCCAGTTGGCC 119693 || ||||| || || |||||| ||||||| | ||| || ||||| | |||| Sbjct 403803 TGAGGCGCTC-GCCGAAAGTCGAGTCCTTGTCGGATATCCAGCGCAGCGCCCACTCGGCC 403745 Query 119694 TTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCT 119739 || |||| ||||| |||| || | |||||| ||||| || |||| Sbjct 403744 TTGCGCTTGATGCACGGGATGGTCTCGATGGCATCGAAGAGGTGCT 403699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972068585200