Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq379 111 2e-19 >seq379 Length=286460 Score = 111 bits (122), Expect = 2e-19 Identities = 467/731 (64%), Gaps = 21/731 (3%) Strand=Plus/Minus Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || |||||||| |||||| | ||| || || || |||| | || |||||| || | | Sbjct 265204 GCGTCCTTGTACAGCATGAACGGCCCACCGGTTTCGATCTGCGCCTCGAGAATGGCGTAC 265145 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGT 106698 |||| | || ||| | || ||| | || || || |||||| |||||| | Sbjct 265144 CACAGCTTCTGCGCCGGG----ATGACCTTCCGCGCGCGACCCTCCTTCTCGTAGCGTTC 265089 Query 106699 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 106758 ||||| || |||||||| | | | | ||| ||||| ||||||| || || || Sbjct 265088 ATAGAGCGCCTCAAACTCGGCGCTGTGCACCTCGTGCAGACCCGGTGCCTCGTTCGGGCA 265029 Query 106759 GAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818 ||| | ||||| | | | |||| || ||||||||||| ||||| |||||||| || Sbjct 265028 GAAGAACGACCAATCCGCGTTCGCCTCGACGCGCTTCATGAATAGGTCGGGAATCCAGAG 264969 Query 106819 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878 | | || || || | || ||||||| | || ||||| || | || || Sbjct 264968 CGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGAG 264909 Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938 ||| || | ||| |||| |||||| ||||| || |||| || | | ||| | || Sbjct 264908 GAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTAGATGGCAAACGCGCCC---GGGCG 264852 Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | || |||| | || |||||||| || | | || |||| ||||| || | Sbjct 264851 CTTGTTGCCGCCTTGGTCCACGTAGCGCGCCGTCGAATCGAACGCGCGCAGCATGGGCAC 264792 Query 106993 AATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCA 107050 | || | || || || || ||| ||| |||||| ||||| | | | Sbjct 264791 GAGCCCGTTCGACACGCCGTTCGTGCCCGCGATGTACGAG--CCCTTGGCGCGGATGTTG 264734 Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 || |||| | |||||||| || || | ||| ||| || ||| || | || || Sbjct 264733 TGAATGTTAAGGCCAATACCGCCCGCACTCTTGCTGATCATGGCGCACGCCTTGAGCGTG 264674 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | ||||| || | ||| ||| ||||| |||| | | ||| || ||| || |||| Sbjct 264673 TCGTAGATGCCTTCGATACTGTCGTCCTTCATGGCCACCAAGAAACAGCTGCTCAGCTGC 264614 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 || | || || || || ||| || || |||| ||||| |||| | || |||| Sbjct 264613 GGGCGCGGGGTCCCCGCGGCGAATAGTGTCGGTGACGCGTGCGTGAAGTAGCGTTCGGAC 264554 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 ||| || ||| |||| | | | || ||||| ||||||||||| | || || Sbjct 264553 ATCAGGTTGTAAGTCTGGATGGCGCGCTCGATGTCGCGTCCGTGGATGCCCACTGCGACG 264494 Query 107291 CGCATAAACAT 107301 ||||| | ||| Sbjct 264493 CGCATGAGCAT 264483 Score = 82.4 bits (90), Expect = 9e-11 Identities = 170/253 (67%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 ||||||| | || || || || ||| ||| ||| ||| ||| | | || || Sbjct 220167 TGGATGTTGAGGCCGATGCCGCCGGCCGTCTTGCTGATCATCGCGCACGTCTTGAGCGTG 220226 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | ||||| || | ||| ||||||||||| | | || ||||||||| ||| || |||| Sbjct 220227 TCGTAGATGCCCTCGATCGAGTCCTCCTTCATCGTGACAAGGAAGCAGCTGCTCAGCTGC 220286 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 || || || || || |||||||| || || | ||||| |||| | | |||| Sbjct 220287 GGATGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAAGCGTGCGTGAAGTAGCGCTCGGAC 220346 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 ||| || ||| ||||| | | || | ||| | ||||||||||| | ||||| Sbjct 220347 ATCAGGTTGTACGTCTCGATCGCGCGCTCGACGTCCGCGCCGTGGATGCCCACCGCCACG 220406 Query 107291 CGCATAAACATGT 107303 ||||| | ||||| Sbjct 220407 CGCATGAGCATGT 220419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976861878160