Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq57 150 4e-31 seq524 136 9e-27 >seq57 Length=599116 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| ||||| ||||| || || || || || || | |||||| | || ||||||| Sbjct 467982 CAAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGA 468041 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || ||||| || || || || |||||||| || |||||||| ||||| || | Sbjct 468042 GCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGA 468101 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || |||||||||||| ||||| || || || | ||||| | Sbjct 468102 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGC 468161 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||| || || ||||| | |||||| Sbjct 468162 CCGTCAGTGTCTTGACGAAGATTTGCAT 468189 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||| || || || |||||||| | |||||| | ||||| ||| Sbjct 467696 ACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCG 467755 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| || || ||||| || |||||||| || ||||| || Sbjct 467756 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGG 467815 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||| || || ||||| || || || || || || | |||||| Sbjct 467816 ATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTG 467875 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 467876 CCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| || ||||| ||||| || | ||||| | || |||||| Sbjct 468209 ACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCG 468268 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || || ||||| ||||| || || ||||| || ||||| || Sbjct 468269 AGCTGCTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 468328 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||||||||| ||||| || | || | ||||| Sbjct 468329 ATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTG 468388 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 468389 CCAGTGAGTGTCTTGACAAAGATCTGCAT 468417 >seq524 Length=649165 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||||||||| || |||||||| || || ||||||||||||| || || | || || Sbjct 612931 CAGAACAAGGTGCAGCGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTCCGACCGTC 612990 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||| ||||| || ||||| || | || || ||||| || || || || || || || Sbjct 612991 CTCGAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCGGGCGGGATCCCCTCCTTATC 613050 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||||||||| ||||| |||||||| || ||||| ||||| | || Sbjct 613051 CTGGATTTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGGGTGATGGT 613110 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || ||||| || || || || | ||||| Sbjct 613111 CTTCCCGGTCAACGTCTTGACAAAGATCTGCAT 613143 Score = 93.3 bits (102), Expect = 9e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || || ||| ||| || || || |||||||| | || || | ||||| |||||| Sbjct 613502 AGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGC 613561 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || ||||| || || || ||||| || || ||||| || ||||| || || Sbjct 613562 TGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613621 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTC 195080 || |||||| || || |||||||| Sbjct 613622 TTGGCCTTGACATTATCGATGGTGTC 613647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474009065578