Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq524 109 4e-19 seq57 107 1e-18 >seq524 Length=649165 Score = 109 bits (120), Expect = 4e-19 Identities = 146/201 (73%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||||||||| ||||| || || | || | || || ||||| || ||| Sbjct 613226 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCCG 613285 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| |||| | ||||||||||| ||||| ||| Sbjct 613286 GCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 613345 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || ||||||| |||| | ||| || || | ||| || || || ||||| || Sbjct 613346 AC--AT--TATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAG 613401 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 |||||||| ||||||||||| Sbjct 613402 CGTCTTCACGAAGATCTGCAT 613422 Score = 109 bits (120), Expect = 4e-19 Identities = 146/201 (73%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| || || || || | || |||| || ||||| || || Sbjct 613511 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 613570 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || |||||||| |||| | ||||||||||| ||||| ||| Sbjct 613571 GCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 613630 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || ||||||| || | || ||| || |||| || ||||| || || ||||| Sbjct 613631 AC--AT--TATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAG 613686 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| |||||||||||||| Sbjct 613687 GGTCTTGACAAAGATCTGCAT 613707 >seq57 Length=599116 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| || | || | || || ||||| || |||||||| Sbjct 468227 TCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAA 468286 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| |||| | ||||||||||| |||||| || || || Sbjct 468287 ATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 468344 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || || | || ||||| || || ||||| ||||| Sbjct 468345 --TGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTGCCAGTGAGTGTCTT 468402 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 468403 GACAAAGATCTGCAT 468417 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || |||||||| | || |||| || ||||| || |||||||| Sbjct 467714 TCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 467773 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| ||||||| Sbjct 467774 ATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTG 467833 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | || || || || || ||||| ||||| || Sbjct 467834 TCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACG 467893 Query 34971 AAGATCTGCATA 34982 || || |||||| Sbjct 467894 AATATTTGCATA 467905 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||||||||| | || | || || ||||| || ||||| || Sbjct 467999 TCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAA 468058 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| |||| | || |||||||| |||||| || || Sbjct 468059 ATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCAC---- 468114 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | ||| || || | || ||||| || ||||| || ||||| Sbjct 468115 GTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGTGTCTT 468174 Query 34967 CACAAAGATCTGCAT 34981 || ||||| ||||| Sbjct 468175 GACGAAGATTTGCAT 468189 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || |||||||| | || | || |||| ||| || ||||| || Sbjct 467486 TCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAG 467545 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || |||||| |||||| Sbjct 467546 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTA 467605 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | |||||| || | || || || || || || || ||||| || Sbjct 467606 TCAATCGTGTCGGACGACTCAACTTCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACG 467665 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 467666 AAGATCTGCAT 467676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631487243952