Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq112 98.7 8e-16 >seq112 Length=929211 Score = 98.7 bits (108), Expect = 8e-16 Identities = 208/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 29669 TCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGT 29728 ||||| |||| ||||| || | |||||| || | | | || || || ||||| |||| Sbjct 920072 TCATCTCGATGGTGGGATACGGCTTGTAACCTTCAACGCAAAAGTCTTCCGCCTTGAAGT 920131 Query 29729 CGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCT 29788 |||| | | | ||| || | ||| || | || |||||||| || | || | || Sbjct 920132 CGTCAATGCTGGTCACGCTACGGTTAATGCGTAGAGTGGGAAAAGGCCGAGGGGTGCGCT 920191 Query 29789 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG-GGTG 29847 |||||| || | | | || |||||||| |||| ||||| ||||||||||| | Sbjct 920192 GGAGCTGTGTTTGTAAGGCGTCGACGTGATCGCGGTATACGTGCGCGTCTCCCAGCTGAA 920251 Query 29848 TGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAG 29907 | || | ||| |||||| |||| || || || |||||| | |||||||| | | Sbjct 920252 TTGA-GAGCTCGTGCGGTTCAGTATCGGTCACATGGGCGATCATGCAGGTGAGGAGCGCG 920310 Query 29908 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGA 29967 ||| ||||| || || || | ||||| |||| ||| | || | ||| || | || Sbjct 920311 TAGGATGCGATATTGAATGGAATGCCGAGTCCCAGGTCAGCGGAGCGCTGATACATGAGA 920370 Query 29968 CACGAGAG 29975 ||||| || Sbjct 920371 CACGAAAG 920378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 30112 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCC 30170 |||||||| || || ||| || | |||||| | | || ||| ||| | || || Sbjct 920588 TGCAGCTGGTCGACGCCCTGACCAGTGTAGTCGGTATCGCA-GTCTACGTATTTAGCGCC 920646 Query 30171 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30230 ||||| | ||||||||| || ||||| || || || || || ||| | || | || Sbjct 920647 AAAATGGCGCCACTGGAAGCCATACACGGGGCCGAGATCGCCTTCTCGACGATGGTTGAG 920706 Query 30231 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30290 ||| | ||||| | |||| | | || || ||| ||||||||||||| || |||| | | Sbjct 920707 GCCGCGGTTGTCGAGAAAGGCGCGCGAGCCATTGCCGTCCCAGATCTTGACGCCCTGCGC 920766 Query 30291 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 |||||| | || ||| || || |||| ||||| |||||||| Sbjct 920767 CGAGAGCAAGGTACTGTCTGTAGAGCCCTTGACAAACCAGAGCAGCTC 920814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408614940665582