Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq524 107 1e-18 seq57 100 2e-16 >seq524 Length=649165 Score = 107 bits (118), Expect = 1e-18 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||||||||| || ||||| ||||| || || ||| | ||| |||| || | |||| Sbjct 613220 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGC 613279 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || ||||| ||||| || || | || | |||||||||||| ||||| Sbjct 613280 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTG 613339 Query 48684 TGTTTTACAGAACCCACAGACTCTGAC-GC-CTCCACCTCCACCGTAATCGTTTTTCCCG 48741 || ||| | | | || | | || || ||| ||||||| || ||||| || |||| Sbjct 613340 GCCTTGACATTATCGATAG--TGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCG 613397 Query 48742 TCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || || || |||||||| Sbjct 613398 TCAGCGTCTTCACGAAGATCTGCAT 613422 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||||||||| || || || ||||||||||| || | || | || || | ||| Sbjct 613504 ATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTG 613563 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| ||||| || || | || | |||||||||||| ||||| Sbjct 613564 CTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 613623 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | | || | ||| ||||| | ||| || || || || || Sbjct 613624 GGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 613683 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||| |||||||| Sbjct 613684 GAGGGTCTTGACAAAGATCTGCAT 613707 >seq57 Length=599116 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| || | ||| |||||| ||| || || || |||||||| || ||| | || || Sbjct 467462 CGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCG 467521 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| ||||| || || || ||||| || || | || | ||||||||| Sbjct 467522 TCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTA 467581 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| || || | | | | || |||| ||| || |||| ||| ||| Sbjct 467582 TCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATC 467641 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||| || || || || |||||||| Sbjct 467642 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| || || ||| | ||| |||| || | |||||| |||||||| Sbjct 468226 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAA 468285 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || || || || || | || | |||||||||||| ||||| || ||| Sbjct 468286 AATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 468345 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||||||||||| ||| || || || || || | || || || Sbjct 468346 GTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTGCCAGTGAGTGTCTTGAC 468405 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 468406 AAAGATCTGCAT 468417 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | || | ||| || || ||| || || || |||||||| || Sbjct 467677 GCCGCCGCGCAGACGAAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGA 467736 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | |||||| |||||||| || || ||||| || || | || Sbjct 467737 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGG 467796 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| ||| || | | | || |||| ||| || Sbjct 467797 AATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGAC 467856 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||| ||||| || || || | || || || || || ||||| Sbjct 467857 CTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935120810482