Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq124 111 2e-19 seq379 86.0 7e-12 >seq124 Length=448922 Score = 111 bits (122), Expect = 2e-19 Identities = 277/418 (66%), Gaps = 2/418 (0%) Strand=Plus/Plus Query 177549 GAAGCACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTC 177608 |||| || |||| ||||||| | || | ||| ||||| || || || | ||| | || Sbjct 102110 GAAGGACTTTTCGACAAACTCGCGGACGGGGTGGGTCTCGCCGGTGGCAAGGACAAAGTC 102169 Query 177609 ATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACC 177668 || || || || || |||||| |||||||| | ||||| ||||||||||| || || Sbjct 102170 CTCGGCGGTGTCCTGCTGGAGCATGCGCCACATGCCCTCAACGTAGTCCTTGGCGTGGCC 102229 Query 177669 CCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCT-CTCACCTTTCACAA 177727 |||||| | |||| |||||| ||||| | ||| ||| ||| || || | Sbjct 102230 CCAGTCGCGCTTCGCGTCGAGGTTGCCGAGGTAGAGGCACT-TCTGCTTGCCGAGGCTGA 102288 Query 177728 TTTGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATT 177787 | | |||| | || ||||| ||||| ||| | || || | ||| | Sbjct 102289 TGTCGGCGACGGCGCGGGTGATCTTGCGGGTGACGAAGGTGCGGCCGCGGCGCGGGCTCT 102348 Query 177788 CGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGA 177847 |||||||||||||||| ||| |||||| ||||| |||| || ||||| || | Sbjct 102349 CGTGGTTGAAGAGGATGCCGTTGCAGGCGTACATGTTGTAGGCCTCGCGGTAGTTGACGG 102408 Query 177848 CGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCT 177907 || |||| || || |||| |||||| || || || |||||||| || ||| Sbjct 102409 TGATCCAGAACGCATACATCTTGGCGACGCCGTACGGCGAGCGCGGGTAGAACGGCGTCG 102468 Query 177908 CCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| | || || || || || || || ||| |||||| || || || ||||| Sbjct 102469 TCTCCGACTGCGGCGTCTCGACAACCTTGCCGTACAGCTCCGACGTCGACGCCTGGTA 102526 >seq379 Length=286460 Score = 86.0 bits (94), Expect = 7e-12 Identities = 175/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || | ||||||||||| | ||| | || | Sbjct 220426 CCGCAGCACATGCTCATGCGCGTGGCGGTGGGCATCCACGGCGCGGACGTCGAGCGCGCG 220367 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || ||||||| | | |||| ||||| | || || |||||| Sbjct 220366 ATCGAGACGTACAACCTGATGTCCGAGCGCTACTTCACGCACGCTTCGCCGACGCTCTTC 220307 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || || || |||||| || ||| ||||||||| || | | ||||||||| Sbjct 220306 AACGCCGGCACGCCGCATCCGCAGCTGAGCAGCTGCTTCCTTGTCACGATGAAGGAGGAC 220247 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || ||| | || ||||| | || || | | ||| ||| ||| ||| ||| || Sbjct 220246 TCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCAGCAAGACGGCCGGC 220187 Query 75452 GGTATTGGGATGCACATCCA 75471 || || || | ||||||| Sbjct 220186 GGCATCGGCCTCAACATCCA 220167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565617897920