Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq443 190 3e-43 seq57 174 2e-38 seq524 167 3e-36 seq15 87.8 2e-12 >seq443 Length=755634 Score = 190 bits (210), Expect = 3e-43 Identities = 516/787 (66%), Gaps = 2/787 (0%) Strand=Plus/Minus Query 196077 GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGA 196136 |||| || || || ||||| || || || |||||||| | || || || | | |||| Sbjct 175429 GGACAGCCTGCGAGCGTGCTAAGCGTACCCTCTCTTCGGCCGCGCAGACCTCGATCGAGA 175370 Query 196137 TTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAG 196196 | || ||| | || || || || || ||||| || | | || ||||| || || || | Sbjct 175369 TCGACTCGCTCTTCGAGGGCATCGATTTCTACACCTCCCTCACTCGTGCGCGCTTCGAGG 175310 Query 196197 AGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACG 196256 || | | || | || | | | | || || || || | || || || ||| Sbjct 175309 AGCTCTGCCAGGACCTCTTCCGTTCGACTCTTGAGCCGGTCGAGAAGGTTCTGCGCGACT 175250 Query 196257 CAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTC 196316 | ||||| || ||||| || || | || || |||||||| || || || |||||||||| Sbjct 175249 CGAAGATCGACAAGTCGAACGTCCACGAGATCGTCCTTGTCGGTGGCTCGACCCGTATTC 175190 Query 196317 CGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376 || || || | | || ||||||||| || || ||||| | |||| Sbjct 175189 CGCGCATCGTGAAGCTCGTCTCCGACTTCTTCAACGGCAAGGAGCCCAACAAGAGCATCA 175130 Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTG 196436 |||| || || || ||||| || ||||| || || ||||| || || ||||| |||| Sbjct 175129 ACCCCGACGAGGCCGTTGCCTACGGTGCCGCTGTGCAGGCCGCCATCCTCTCCGGTGACA 175070 Query 196437 ACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTG 196496 | | || || || || || || || ||||| || || | || || ||| | | Sbjct 175069 CCTCCGAGAAGACGCAGGAGCTCCTCCTTCTCGATGTCGCTCCTCTCTCTCTCGGTATCG 175010 Query 196497 AAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGA 196556 | || || ||||| || | || | || | | ||||| ||| | ||||| |||| Sbjct 175009 AGACCGCCGGTGGCGTCTTCACGCCCCTCATCAAGCGCAACACGACTGTGCCGACGAAGA 174950 Query 196557 AGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATG 196616 || | |||| || || || || || || || || ||||| | || || || || | Sbjct 174949 AGTCCGAGATCTTCTCGACTTACTCGGACAACCAGCCCGGTGTGCTCATCCAGGTGTACG 174890 Query 196617 AAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGA 196676 | || || ||| | || | ||||| ||| | | || || | ||||| | | || | Sbjct 174889 AGGGCGAGCGCGCGCGCACGAAGGACAACAACATCCTCGGCAAGTTCGAGCTCTCCGGCA 174830 Query 196677 TTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATG 196736 | || | ||||| | |||||||| ||||| | || ||||||| | ||||| || | Sbjct 174829 TCCCGCCCGCACCTCGCGGTGTTCCTCAGATCGAGGTCACCTTCGATGTCGACGCCAACG 174770 Query 196737 GAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG-ATTGTGATT 196795 | || || |||||||| || | |||||| | | ||||| || ||| | || || Sbjct 174769 GTATCCTGAACGTCACTGCCGCCGACAAGACGACCGGCAAGTC-GAATCGCATCACCATC 174711 Query 196796 ACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAA 196855 || || |||||||| || || || |||||||| ||||| || |||||| || || || Sbjct 174710 ACGAACGACAAGGGCCGTCTGTCGAAGGAGGACATTGACCGCATGGTTGCTGAGGCTGAG 174651 Query 196856 AAGTACA 196862 | ||||| Sbjct 174650 AGGTACA 174644 Score = 154 bits (170), Expect = 2e-32 Identities = 332/491 (68%), Gaps = 14/491 (3%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| || || ||||||| || || ||||| | ||||| ||||| || | ||| ||||| Sbjct 403226 TGTCCCCGCGTACTTCAACGACTCCCAACGTCTTGCGACCAAGGATGCAGGTGCCATTGC 403167 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || ||| | || ||||| || || || ||||| || ||||| || ||||| Sbjct 403166 TGGCCTTGACGTTCTCCGTATCATCAACGAGCCCACGGCGGCCGCTATTGCCTACGGTCT 403107 Query 195841 GGACA---AG---AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||| || || ||||| |||| | || | ||||| |||||||||||||| Sbjct 403106 TGACCGCCAGTCCAAGAAGGA-GAAGGTC-----GTCCTCATCTTCGATCTCGGTGGTGG 403053 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || ||||| || || |||| || |||||| | |||| || ||||| || || Sbjct 403052 TACTTTCGATGTGTCCCTACTCAGCATCACCGGTGGTGTCTTCGCCGTCAAGGCCACCGC 402993 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGA-TGCACGTCTTCTCCGTCATTTGTCTG 196013 || || || ||||| |||||||| || ||||| ||| || || || || Sbjct 402992 CGGCGACACCCATCTCGGTGGTGAGGACTTCGACAACAC-CCTGCTTGAGCACTTCAAGA 402934 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | |||||| || |||| ||| | || || |||| | ||| | || || ||||| | Sbjct 402933 ACGAGTTCAAGCGCAAGACCAAGCACGACATCTCTGACGACCCTCGTGCGCTCCGTCGTC 402874 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 | | | || || || |||||||| || || |||||| | || || | ||||| Sbjct 402873 TGCGCAGCGCTTGCGAGCGTGCCAAGCGCACCCTCTCTAGCGTTCCCCAGACCACGGTTG 402814 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 || | || ||| ||| | || ||||||| | | | ||||| ||||| ||||||| Sbjct 402813 AGGTCGACTCGCTGTACGGAGGCGAGGACTTCTCTGCGAACATTACTCGTGCTCGTTTTG 402754 Query 196194 AAGAGTTAAAC 196204 | ||| | ||| Sbjct 402753 AGGAGATCAAC 402743 Score = 150 bits (166), Expect = 2e-31 Identities = 249/357 (70%), Gaps = 2/357 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| ||||| ||| | ||||| || | |||||||||||||| || || || | | | Sbjct 175927 CCCGAGGAAATCTCGGCGATGGTCCTGGTCAAGATGAAGGAGACGGCCGAGTCCTACCTC 175868 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || | || || | || || || || ||||||| || || ||||| Sbjct 175867 GGACACACCGTCTCCAACGCCGTCATCACCGTCCCCGCCTACTTCAACGACTCGCAACGT 175808 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGA 195810 |||||||| |||||||||| || || ||||||| || ||| || | || ||||| || Sbjct 175807 CAGGCGACGAAGGACGCTGGTGTCATCTCGGGTCTCAA-TGTCCTCCGTATCATCAACGA 175749 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || || || || || || ||||| |||||||| | || || || || Sbjct 175748 GCCCACCGCAGCCGCCATCGCCTACGGTCTTGACAAGAAGGTCGCCGGCGAGCGCAACGT 175689 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930 | ||||| || || || || ||||| || ||||| || || || | || || | || Sbjct 175688 CCTCATCTTCGACCTTGGCGGAGGTACCTTCGATGTGTCCCTGCTGACCATCGAGGAGGG 175629 Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| || ||||| || || || || || || || || ||||| || ||||| Sbjct 175628 TATCTTCGAGGTCAAGGCCACCGCCGGCGACACCCACCTTGGCGGTGAGGACTTCGA 175572 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 195383 GGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGAT 195442 || ||||| || || || ||||| || ||||| | | || |||||| | || || Sbjct 403751 GGCAACCGCACGACACCGTCGTATGTCGCCTTCTCGTCAGACGAGCGTCTCATCGGCGAC 403692 Query 195443 GCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTT 195502 || |||||||||||| | || |||||||| ||| || ||||||||||| |||||||| Sbjct 403691 GCGGCAAAAAATCAGGCGGCGATGAACCCGCGCAACACGGTCTTTGACGCAAAGCGTCTC 403632 Query 195503 ATTGGTCGC 195511 || || ||| Sbjct 403631 ATCGGCCGC 403623 >seq57 Length=599116 Score = 174 bits (192), Expect = 2e-38 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || || || || || || || || ||||| || ||||| ||||||| Sbjct 467906 GTATGCAAATATTCGTTAAGACACTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCGT 467847 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| ||||||| ||||| || || ||||| ||||||||||| || | Sbjct 467846 CCGACACGATCGACAACGTCAAAGCGAAGATCCAGGACAAGGAGGGCATTCCACCTGACC 467787 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || ||||| ||||| || || ||||| || ||||| || || || | ||||||| Sbjct 467786 AGCAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCGGATTACA 467727 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || | || |||||||| || || || || || || Sbjct 467726 ACATCCAGAAGGAGTCGACACTGCATCTCGTCCT 467693 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || || || || ||||| || ||||| ||||| || Sbjct 468189 ATGCAAATCTTCGTCAAGACACTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCTTCG 468130 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || ||||| || || ||||||||||| || || || ||| Sbjct 468129 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCGCCAGACCAG 468070 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| ||||| || || || || | || || ||| Sbjct 468069 CAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTTTCGGACTATAAC 468010 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || |||||||| ||||| ||||||| Sbjct 468009 ATCCAGAAGGAGTCGACTCTCCACCTTG 467982 Score = 149 bits (164), Expect = 8e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || ||||| || || ||||| | || ||||||||||| Sbjct 467676 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACGATCACGTTGGAAGTTGAGTCGTCC 467617 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || |||||| |||| || ||||| || |||||||| ||||| || ||||| ||| Sbjct 467616 GACACGATTGATAACGTCAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 467557 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||| | || || || || || || | ||||||||| Sbjct 467556 CAGCGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACTCTTTCGGATTACAAC 467497 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 467496 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCT 467465 Score = 95.1 bits (104), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923 ||| ||||| ||||| || || ||||| || || |||||||||||||| ||||| || || Sbjct 468699 GCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGA 468640 Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| |||||||| | || |||||||| || || ||||| || Sbjct 468639 CACGATCGATAATGTTAAGGCCAAGATCCAGGACAAGGAGGG 468598 >seq524 Length=649165 Score = 167 bits (184), Expect = 3e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || ||||| |||||||| ||||| Sbjct 613707 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCAGC 613648 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| |||||||| |||| |||||||| || || ||||| ||||| || ||||| ||| Sbjct 613647 GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 613588 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || |||||||| || ||||| || ||||| || || ||| ||||||||||| Sbjct 613587 CAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCTCTGATTACAAC 613528 Query 172042 GTTCAAAAGGAG 172053 | || |||||| Sbjct 613527 ATCCAGAAGGAG 613516 Score = 145 bits (160), Expect = 1e-29 Identities = 173/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || || | || || || || |||||||| || || ||||| || Sbjct 613143 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACCCTGGAAGTCGAGTCCTCG 613084 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| || || || || |||||||| || || || ||||| ||| Sbjct 613083 GACACGATTGACAACGTCAAGGCGAAAATCCAGGATAAGGAGGGGATCCCGCCCGACCAG 613024 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | ||||| || || || || || || || || || || || | |||||||| Sbjct 613023 CAGCGCTTGATTTTCGCCGGCAAGCAACTCGAGGACGGTCGGACGCTGTCCGATTACAAT 612964 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || |||||||| || || ||||||||||| | || || ||||| ||||| Sbjct 612963 ATCCAGAAGGAGTCCACGCTGCACCTTGTTCTGCGCCTGCGTGGTGGCATGCAA 612910 >seq15 Length=112099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 191/283 (67%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 195706 AGATGCAGTTG-TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764 |||| |||| | |||||| | || |||||| || | || || ||||| || |||| Sbjct 77661 AGAT-CAGTGGCTGACTGAGCTCGCAGACTTCAACGACGCTCAGCGTCAGGCCACCAAGG 77603 Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTG 195824 | || | | || || ||||| ||| ||| | || ||||| || || || || || | Sbjct 77602 ATGCAGGCACGATCGCCGGTCTCAACGTTCTGCGCATCATCAACGAGCCCACGGCCGCCG 77543 Query 195825 CAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884 | || || || || || |||||||| || || || | | | | ||| |||| Sbjct 77542 CCATCGCGTACGGCCTCGACAAGAA---GGGCGGCGAGCAGCAGATCATCGTCTACGATC 77486 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 |||||||||| || || |||||||| || ||| || || | || | ||||| || Sbjct 77485 TCGGTGGTGGAACTTTCGATGTCTCGCTCCTCTCGATCGACGACGGCGTCTTCGAGGTGC 77426 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || ||||| || ||||| ||||| || || ||||| Sbjct 77425 TCGCCACCGCCGGTGACACGCATCTTGGTGGCGAGGACTTCGA 77383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858008768480