Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq223 113 1e-19 >seq223 Length=844892 Score = 113 bits (124), Expect = 1e-19 Identities = 191/277 (69%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 302567 TAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTA 302626 ||| ||| |||| | ||||| || |||||||| || || ||||| | || || | Sbjct 335033 TAACGTCCTCCAGAGCCTTGACCAACCGACGCTGGATGTACCCAGTCTCGGCAGTCTTGA 334974 Query 302627 CAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTC 302686 |||| |||||||| ||||| | |||||| ||||||| ||||| || | ||| | || Sbjct 334973 CAGCCGTATCAATGAGACCCTCGCGACCAGCCATAGCGTGGAAAAAGAACTCCTGAGGAG 334914 Query 302687 GTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACT 302746 | || | | | ||| | || ||||| || ||||||||||||| |||| || Sbjct 334913 TCAAGCCGCGGAGGTACGAGTTTTCGACGAAGCCTCGCGCCTCGGGCGTGAAGTCGTCCT 334854 Query 302747 TGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGT 302806 | || ||||| ||||| || | || || ||||| | || || ||||| || || ||| Sbjct 334853 TCGTGAAGTGCGGCAGCGTGCGGTGCTTGAAGCCGAACGGAATCCGCTTGCCCTCGACGG 334794 Query 302807 TCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| || | | | | ||||||||| || || Sbjct 334793 ACTGCTGGCCGACGAAGACAGACATCTGCGAGATGTT 334757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807530007958