Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq524 145 5e-30 seq57 120 2e-22 >seq524 Length=649165 Score = 145 bits (160), Expect = 5e-30 Identities = 160/211 (76%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||||||||||||||||| ||||| || || |||| | || || || Sbjct 613217 AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGC 613276 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| |||||||||||||| || |||||||| |||| | ||||||||||| | || Sbjct 613277 TGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613336 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || ||||||| ||| || |||||| || | ||| || ||||| Sbjct 613337 TTGGCCTTGAC--AT--TATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTT 613392 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || ||||| || |||||||||||| Sbjct 613393 GCCCGTCAGCGTCTTCACGAAGATCTGCATG 613423 Score = 136 bits (150), Expect = 3e-27 Identities = 152/201 (76%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| ||||| || || || || |||| |||| || || ||||| || Sbjct 613511 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 613570 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 || |||||||| || |||||||| |||| | ||||||||||| | || || ||| Sbjct 613571 GCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 613630 Query 34901 ACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 || || ||||||| || ||| |||||| || | || |||||||| || ||||| Sbjct 613631 AC--AT--TATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAG 613686 Query 34957 GGTCTTTACAAAGATCTGCAT 34977 |||||| |||||||||||||| Sbjct 613687 GGTCTTGACAAAGATCTGCAT 613707 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | ||| ||||||||| || || || || || || | || | || Sbjct 612931 CAGAACAAGGTGCAGCGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTCCGACCGTC 612990 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||| |||| || |||||||| |||| | ||||||||| || Sbjct 612991 CTCGAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCGGGCGGGATCCCCTCCTTATC 613050 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| |||||| | |||| || || |||||| || | ||| ||||| Sbjct 613051 CTGGATTTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGGGTGATGGT 613110 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || | ||||| ||||||||||||||| Sbjct 613111 CTTCCCGGTCAACGTCTTGACAAAGATCTGCATG 613144 Score = 114 bits (126), Expect = 8e-21 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| || || ||||| || || ||||| | || || |||||||| ||| Sbjct 612719 GTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGAGTTGCTTGCCG 612778 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 ||||| || || || |||||||| |||| | || |||||||| | ||||| ||| Sbjct 612779 GCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGATTTTCGCCTTG 612838 Query 34901 ACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTC 34960 ||| | |||| || || |||||| || | || || ||||| || || || ||| Sbjct 612839 ACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGCCAGTAAGCGTC 612898 Query 34961 TTTACAAAGATCTGCATG 34978 || || || || |||||| Sbjct 612899 TTGACGAAAATTTGCATG 612916 >seq57 Length=599116 Score = 120 bits (132), Expect = 2e-22 Identities = 158/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||||||||| |||||||| || |||| | || Sbjct 468206 AGGACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCT 468265 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| || || || ||||||||||| |||| | ||||||||||| Sbjct 468266 TCGAGCTGCTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 468325 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || || ||| || || | || || Sbjct 468326 TGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGAT 468381 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || ||||| ||||| ||||||||||||||| Sbjct 468382 GGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATG 468418 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | |||||| || || | ||| ||||||||| ||||| || ||||| Sbjct 467450 CCGCCACGCAAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAA 467509 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || |||| ||||| ||||||||||| || || |||||||| | || Sbjct 467510 AGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 467569 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || |||||| | |||| || | ||| || Sbjct 467570 ATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACT 467629 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || || ||||| || || || ||||| || |||||||||||| Sbjct 467630 TCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATG 467677 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| |||||||||||||| || |||| | || || || ||||| |||||||| Sbjct 467998 CTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 468057 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || ||||||||| |||| | || |||||||| | || || || ||| Sbjct 468058 AATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTT 468117 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | || |||||||| ||||| || ||||| || Sbjct 468118 GTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGTGTCTTGAC 468177 Query 34966 AAAGATCTGCATG 34978 ||||| |||||| Sbjct 468178 GAAGATTTGCATG 468190 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || ||||| || |||| |||| || || ||||| ||||| || Sbjct 467713 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 467772 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || ||||||| Sbjct 467773 GATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTT 467832 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | || || ||||| || ||||| ||||| || Sbjct 467833 GTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAAC 467892 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 467893 GAATATTTGCAT 467904 Score = 96.9 bits (106), Expect = 2e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||||||||||||| |||||||||||||| ||| |||| |||| Sbjct 468434 AGGACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAGTCCGACAGGGTGCGACCATCC 468493 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || |||||||| || || ||||| || Sbjct 468494 TCGAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGATC 468531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690680350546