Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq524 102 5e-17 seq57 95.1 8e-15 >seq524 Length=649165 Score = 102 bits (112), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || |||||||| || || ||||||||||| ||||| ||||| | || || | || Sbjct 613504 ATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTG 613563 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || || ||||| |||| |||||||| || |||| | || || ||||| || || Sbjct 613564 CTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 613623 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | |||| || | ||||||||| || || || || | |||||| || || || | Sbjct 613624 -GGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGG 613682 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | || || |||||||||||||| Sbjct 613683 TGAGGGTCTTGACAAAGATCTGCAT 613707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || || ||||||||||| || || || |||| || | ||| Sbjct 612941 TGCAGCGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTCCGACCGTCCTCGAGTTGC 613000 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| |||||||| |||||||| || |||| | || || || || |||||| Sbjct 613001 TTGCCGGCGAAAATCAAGCGCTGCTGGTCGGGCGGGATCCCCTCCTTATCCTGGATTTTC 613060 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | || | ||| | ||||| || || || || | ||||| || || || || Sbjct 613061 -GCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAGGGTGATGGTCTTCCCGGT 613119 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 ||||| || |||||||||||||| Sbjct 613120 CAACGTCTTGACAAAGATCTGCAT 613143 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| |||||||| ||||| |||| || | || Sbjct 613220 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGC 613279 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| ||||||||| || |||| | || || ||||| || || Sbjct 613280 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTG 613339 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | ||| || | ||||| || || || || | |||||||| || || || Sbjct 613340 GCCTTGA-CATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGT 613398 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||| || || ||||||||||| Sbjct 613399 CAGCGTCTTCACGAAGATCTGCAT 613422 >seq57 Length=599116 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| || ||||| ||||| |||| || | || Sbjct 468215 TGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCGAGCTGC 468274 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||||||||| | || ||||| || |||| | || || ||||| || ||| Sbjct 468275 TTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 468334 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| |||| ||| | |||||| || ||||| || | |||||| || || || || Sbjct 468335 GCCTTC-ACATTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTGCCAGT 468393 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || |||||||||||||| Sbjct 468394 GAGTGTCTTGACAAAGATCTGCAT 468417 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | ||| || | || | ||| || ||| ||| || || ||||||||||| || Sbjct 467449 ACCGCCACGCAAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGA 467508 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| ||||| || || ||||| || || | |||||||| || | || Sbjct 467509 AAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 467568 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701 | || || || || || ||| || | || | |||||| || || || Sbjct 467569 GATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAAC 467628 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||||||| || || || | ||| || || ||||||||||| Sbjct 467629 TTCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701860753280