Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq379 118 1e-21 seq48 82.4 7e-11 >seq379 Length=286460 Score = 118 bits (130), Expect = 1e-21 Identities = 934/1490 (63%), Gaps = 101/1490 (7%) Strand=Plus/Minus Query 146902 TGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGAC 146961 || ||||||||||| || || || | || | ||||| ||| | ||||| || || Sbjct 265922 TGGAACTCGCCCGCGAGGACGCGGCGCGTGTAGATGTTGCTCGTGTACGGCTCGAAGCAC 265863 Query 146962 TCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAA 147021 || || ||| | || ||| ||| ||||| |||||| ||| | || | || Sbjct 265862 TCGTTGAAGCCCAGGATCTGGCTCGTCCCCGCGGTCGGCATGGGCGCGAGCAGGAGCGAG 265803 Query 147022 TTTCGCAGACC-GTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACA--TCGAC 147078 || |||||||| || ||| || || || ||||| | | ||||||||| | ||| Sbjct 265802 TTGCGCAGACCTGTGCGCGCG-ATCTTCTCCTTGAGGCTCGCCCAGTCCCAGAGGTCG-- 265746 Query 147079 GAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTG-GCGGGACTGCCAGC 147137 | |||||| || ||||| ||||||||| ||| || | ||| ||||| ||| | Sbjct 265745 GTGGGCGTGACACCCCACAGGTCGTACTGCAGCTTGCCCTG-CTGCGCGGGCGAGCCCAC 265687 Query 147138 GAACGTAGTGTAG----CTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTC 147193 |||| |||| | |||||||| ||||| || | ||| ||||||||||| Sbjct 265686 CCACGTCTCGTAGGGCCCATCCGTCGC----CGCCATCTCGCTGCTCGCCTCGAGCGCAG 265631 Query 147194 CATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAG 147253 | | ||| ||||| ||| ||| || | ||| || | ||| || |||||||| | | Sbjct 265630 CGTGGTAGATGGTCTCGAAGATCTGCTGGTTGAGCTTGCGCGCCTCCGCGCTCTCGAAGG 265571 Query 147254 GCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGAT 147313 ||| || || || ||| | || || | ||||| | |||||||| || || || | Sbjct 265570 GCAGGCGTAGCGCCATGAAGACGTCCGCGAGGCCCTGCACGCCGACGCCAATGGGCCGGT 265511 Query 147314 GCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATCTTG 147372 | |||||| || ||| |||| | ||| |||| ||| || || ||| || Sbjct 265510 GGCGCATGTTGCTCCGGCGCGC-CTCGGGGACGGGGTAGTAGTTCACGTCGATGATCCTG 265452 Query 147373 TTGAGGTT--ACGCACTACAACTTTAGTTATTGTTTTG-AGTTTCTCGAAATCATAAGTC 147429 || ||||| ||||| || | ||| | || || || || |||| || | || Sbjct 265451 TTCAGGTTGAACGCA--ACGATTTTCGCGAT-GTCGTGCAGCTTCTGAAAGTTGTACACG 265395 Query 147430 CCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTC 147489 |||| | || | ||| | ||| | ||||| |||||||| ||||| ||||| | Sbjct 265394 CCGT--TGGAGATAAACG--TCGGTAGA--GCGATGGACGCCAGGTTGCAAACGGCGATT 265341 Query 147490 TCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT------- 147542 || |||| | ||||| | ||| |||| ||| |||||| | || || Sbjct 265340 TCATCGGGCGAGGAGTACTCGATGATCTCGGTGCAGAGGTTGGACGACTTGATCGTGCCG 265281 Query 147543 ---------------GACT------------------CCCAAATTTTGCTG--------A 147561 |||| | ||||| | || | | Sbjct 265280 AGGTTCTGCTGGTTCGACTTGGCTGGAGATGCATGAGCACAAATCTCGCGGGGCCACGAA 265221 Query 147562 TTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGC 147621 ||||| || | ||| ||||| ||| | |||||| |||| || ||||| |||| ||| Sbjct 265220 CTGCTTA-CCATTCGCA-GCGTCCTTGTACAGCATGAACGGCCCACCGGTTTCGATCTGC 265163 Query 147622 GTTTCAACGATAAACCTATG-CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTC 147680 | || | || | || ||| | |||||| | | || ||| ||| ||||| Sbjct 265162 GCCTCGAGAATGG-CGTACCACAGCTTCTGCGCCGGGATGACCTTCCGCGCGCGACCCTC 265104 Query 147681 GTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAA-TCGGCAAGGCCGG 147739 || ||||| || || || | | |||||||||| ||| || ||| ||| || || | Sbjct 265103 CTTCTCGTAGCGTTCATAGAGCGCCTCAAACTCGGCGCTGT-GCACCTCGTGCAGACCCG 265045 Query 147740 GACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACA 147799 | || | ||| || | | |||||| ||| ||| | ||||| ||| || | Sbjct 265044 GTGCCTCGTTCGGGCAGAAGAACGACCAATCCGCGTTCGCCTCGACGCGCTTCATGAATA 264985 Query 147800 GATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGT 147859 | || || | ||| |||||||| | || || ||||| | || || ||| || Sbjct 264984 GGTCGGGAATCCAGAGCGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTTGCCGTGGT 264925 Query 147860 T---GCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGG 147916 | ||| || | || | ||||||| | |||||| || || | ||||| || Sbjct 264924 TCTTGCG---CAGGTCGAGGAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTAGATGG 264868 Query 147917 CCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACA 147973 | | ||| || ||||| ||||| ||||| || | |||| || | | ||| Sbjct 264867 CAAACGCGCCCGGGCGCTTGTTGCCGCCTTGGTCCACGTAGCGCGCCGTCGAATCGAACG 264808 Query 147974 CGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGC 148033 |||||| |||||| | || ||| ||| |||||| ||| ||| | ||| Sbjct 264807 CGCGCAGCATGGGCACGAGCCCGTTCGACACGCCGTTCGTGCCCGCGATGTACGAGCCCT 264748 Query 148034 GGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACT-TTGAT-ATGGCAGC 148091 ||| || | | ||| | ||||| |||||| ||||| || ||| ||| | || || Sbjct 264747 TGGCGCGGATGTTGTGAATGTTAAGGCCAATACCGCC--CGCACTCTTGCTGATCATGGC 264690 Query 148092 GCAATCGCCC--AATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAA 148149 ||| |||| | || ||||||||| ||||| ||||||| || | | | | ||| Sbjct 264689 GCA--CGCCTTGAGCGTGTCGTAGATGCCTTCGATACTGTCGTCCTTCATGGCCACCAAG 264632 Query 148150 AAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGC 148209 ||||| | || ||||| | | || ||||| | ||| || || || ||||||| Sbjct 264631 AAACAGCTGCTCAGCTGCGGGCGCGGGGTCCCCGCGGCGAATAGTGTCGGTGACGCGTGC 264572 Query 148210 GTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCG 148269 || || | || ||||| | || |||| || ||| ||||||||| ||| Sbjct 264571 GTGAAGTAGCGTTCGGACATCAGGTTGTAAGTCTGGATGGCGCGCTCGATGTCGCGTCCG 264512 Query 148270 TGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319 || ||||||| ||||||||||||||||| ||||| || || || || || Sbjct 264511 TGGATGCCCACTGCGACGCGCATGAGCATCTGCTGAGGCCGCTCAGCGAC 264462 Score = 109 bits (120), Expect = 5e-19 Identities = 421/644 (65%), Gaps = 18/644 (3%) Strand=Plus/Plus Query 146896 ACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCA 146955 ||||| || ||||||||||| ||||| || | || | ||||| ||| | ||||| Sbjct 218913 ACCACCTGGAACTCGCCCGCGAGCACGCGGCGCGTGTAGATGTTGCTCGTGTACGGCTCG 218972 Query 146956 AAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAAC 147015 || |||| || ||| | || ||| ||| | || || ||||| ||||| |||| Sbjct 218973 AAGCACTCGTTGAAGCCGAGGATCTGGCTCGTCGACGCCGTCGGCATCGGCGCCAGCAAC 219032 Query 147016 AATGAATTTCGCAGACC-GTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACAT 147074 | || || ||||| || || ||| | ||| | ||||| | | ||||||||||| Sbjct 219033 AGCGAGTTGCGCAGGCCTGTGCGCGC-GATCTGCTCCTTGAGGCTCGCCCAGTCCCACAG 219091 Query 147075 CGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTG-GCGGGACTGC 147133 || ||||| ||| ||||| ||||||||| ||| || | | ||| || || || Sbjct 219092 GTCCGTCGGCGTGACGCCCCACAGGTCGTACTGCAGC-CTGCCCTGCTGCGCAGGCGAGC 219150 Query 147134 CAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTC 147193 | | |||| ||| || ||||||| || | ||| | ||||||||||| Sbjct 219151 CGACCCACGTCTCGTACGGGCCCTCGCGCTCGGCGAGCTCAGACGACGCCTCGAGCGCGG 219210 Query 147194 CATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAG 147253 | | ||| ||||| ||| ||| || ||| || | ||| || ||| ||| | | Sbjct 219211 CGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTTGCGCGCCTCCGGGCTGTCGAACG 219270 Query 147254 GCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGAT 147313 ||| ||||| | || || || || || | ||||| | |||| |||||| || || | Sbjct 219271 GCAGGCGCAGGATCATGAACGCGTCCGCGAGGCCCTGCACGCCGATGCCGATGGGCCGGT 219330 Query 147314 GCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATCTTG 147372 | ||||||||| ||| ||| | | ||| |||| ||| || || |||||| Sbjct 219331 GGCGCATGTTGCTGCGGCGCGC-CTCGGGCACGGGGTAGTAGTTCACGTCGATGATCTTG 219389 Query 147373 TTGAGGTTACGCACTACAACTTTAGTTATTGTTTTG-AGTTTCTCGAAATCATAAG---T 147428 || ||||| || | || || || | | || || || |||| ||| || || | | Sbjct 219390 TTCAGGTTGCGTGCGACGACCTTGGCGA-CGTCGTGCAGCTTCTGGAAGTCGTACGATTT 219448 Query 147429 CCCGTCTTC-GACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487 | ||| | | |||| | | | | || || || || ||||| ||||| |||||| Sbjct 219449 CTTGTCGGCGGTCACG-AAGGACGG---CAGCGCAATTGAGGCCAGGTTGCACACGGCCA 219504 Query 147488 TCTC-TTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT 147530 || | ||||| | ||||| ||||| |||| ||||||||| Sbjct 219505 CTTCGTCCGGCG-CAGAGTACTCAACGATCTCGGTGCACAGGTT 219547 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 |||||||| || ||| |||| ||| ||||||| ||||||| ||| |||||||||||| Sbjct 220356 TACGTCTCGATCGCGCGCTCGACGTCCGCGCCGTGGATGCCCACCGCCACGCGCATGAGC 220415 Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356 |||||||| || || |||||||| | ||| ||| || ||||| ||||| Sbjct 220416 ATGTGCTGCGGCCGCTCGGCAACGCGGCCGTTAATCCGCAGGAGATACGAGCGCTCGAGC 220475 Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 || ||| | || ||||| | ||| | || || | ||||| Sbjct 220476 GTCTTGAAGCCGAAGTATTGGTAGTGGAAGTCGCGGTCGTA 220516 >seq48 Length=83013 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 |||||||| || ||| |||| ||| ||||||| ||||||| ||||||| |||||||| Sbjct 59645 TACGTCTCGATCGCGCGCTCGACGTCCGCGCCGTGGATGCCCACCGCGACGTGCATGAGC 59586 Query 148297 ATGTGCTGTGGTCGTTCGGC 148316 |||||||| || || ||||| Sbjct 59585 ATGTGCTGCGGCCGCTCGGC 59566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608018620240