Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq524 86.0 6e-12 >seq524 Length=649165 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || || ||||| || | ||||| | |||||||| || Sbjct 613144 CATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACCCTGGAAGTCGAGTCCTC 613085 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || || ||||| ||||| ||||| || |||||||| || Sbjct 613084 GGACACGATTGACAACGTCAAGGCGAAAATCCAGGATAAGGAGGGGATCCCGCCCGACCA 613025 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| | | |||| || |||||| |||||||| || | | | | |||| ||||||| Sbjct 613024 GCAGCGCTTGATTTTCGCCGGCAAGCAACTCGAGGACGGTCGGACGCTGTC--CGATTAC 612967 Query 25352 AATATTCAAAAAGAATCCAC 25371 ||||| || || || ||||| Sbjct 612966 AATATCCAGAAGGAGTCCAC 612947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091428994880