Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq524 123 2e-23 seq57 116 3e-21 >seq524 Length=649165 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||| ||||||||||| |||| | || || |||| || |||||||| || Sbjct 613225 CGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCC 613284 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 || || |||| ||||||||||| | || | || |||||||||| |||||| ||| Sbjct 613285 GGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 613344 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | | | | ||||| || || ||||||| |||||||| || ||||||| || Sbjct 613345 GACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAGCGT 613404 Query 35719 TTTCACAAATATCTGCAT 35736 ||||| || |||||||| Sbjct 613405 CTTCACGAAGATCTGCAT 613422 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 ||| | ||| |||||||| || ||||||||||| | | || || | || || ||||| Sbjct 613504 ATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGCTG 613563 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| || ||||| |||| ||||||||||| | || | || |||||||||| |||||| Sbjct 613564 CTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 613623 Query 35653 TTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 ||| | | | | | |||||||| || || ||||| | |||||| || || || || Sbjct 613624 GGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 613683 Query 35713 CAAAGTTTTCACAAATATCTGCATT 35737 | || || ||||| ||||||||| Sbjct 613684 GAGGGTCTTGACAAAGATCTGCATT 613708 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||||| || || || |||| || || ||||| || || || Sbjct 612952 CTCCTTCTGGATATTGTAATCGGACAGCGTCCGACCGTCCTCGAGTTGCTTGCCGGCGAA 613011 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | | |||||| ||| ||| ||| || | || Sbjct 613012 AATCAAGCGCTGCTGGTCGGGCGGGATCCCCTCCTTATCCTGGAT-TTTCGCCTTGACGT 613070 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || || |||| ||||| || || || ||||| || || | Sbjct 613071 TGTCAATCGTGTCCGAGGACTCGACTTCCAGGGTGATGGTCTTCCCGGTCAACGTCTTGA 613130 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 613131 CAAAGATCTGCAT 613143 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | ||| |||||||| || || ||||| |||| | || ||| |||| || Sbjct 612706 ACCAAGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTC 612765 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | ||||||||||| | || | | ||||||||| Sbjct 612766 GAGTTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTG 612825 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| || | |||| | | ||| ||| || || ||||| | |||||| || | Sbjct 612826 GAT-TTTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCT 612884 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | || || || || || ||||| Sbjct 612885 TGCCAGTAAGCGTCTTGACGAAAATTTGCAT 612915 >seq57 Length=599116 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || | || || |||||||| || ||||| Sbjct 467713 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 467772 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||| || |||| || Sbjct 467773 GATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATC-TTCGCTTTGACGT 467831 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| ||| || ||||||| ||||||||| || || || | || || | Sbjct 467832 TGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAA 467891 Query 35724 CAAATATCTGCAT 35736 | ||||| ||||| Sbjct 467892 CGAATATTTGCAT 467904 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| || | || || | ||| | ||| |||||| || ||||||||||| | Sbjct 467450 CCGCCACGCAAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAA 467509 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||| |||||| || || || || | ||||||||||| | ||| Sbjct 467510 AGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 467569 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||| ||| |||||| ||| | | | | ||||||| ||| || || Sbjct 467570 ATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACT 467629 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||||||| || || |||| || || || || |||||||| Sbjct 467630 TCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || |||| || |||||||| || ||||| Sbjct 468226 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAA 468285 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | || |||||||||| |||||| ||||| | | Sbjct 468286 AATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 468345 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||||| |||||| || || || || | || || || Sbjct 468346 GTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTGCCAGTGAGTGTCTTGAC 468405 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 468406 AAAGATCTGCAT 468417 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || | | || || |||| || |||||||| || || || Sbjct 467998 CTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 468057 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| |||||| ||||| || Sbjct 468058 AATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 468116 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || || | Sbjct 468117 TGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGTGTCTTGA 468176 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 468177 CGAAGATTTGCAT 468189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790590952720