Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq379 127 2e-24 seq524 120 3e-22 seq57 116 4e-21 seq101 87.8 2e-12 seq48 84.2 2e-11 >seq379 Length=286460 Score = 127 bits (140), Expect = 2e-24 Identities = 368/561 (66%), Gaps = 9/561 (2%) Strand=Plus/Plus Query 7563 TCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTT 7622 ||| || ||||| ||||||| || |||||||| ||||| ||||| || |||| | Sbjct 264476 TCAGCAGATGCTCATGCGCGTCGCAGTGGGCATCCACGGACGCGACATCGAGCGCGCCAT 264535 Query 7623 GGAAACGTACCAAATGATGTCTTTGAAAC--AGTTTACGCACGCTTCGCCCACCATGTTT 7680 | || ||| | ||||||| ||| | || |||||||| || || || | || Sbjct 264536 CCAGACTTACAACCTGATGTCC--GAACGCTACTTCACGCACGCGTCACCGACACTATTC 264593 Query 7681 GCCGCGGGCACAAACGCGCCT-CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGA 7739 |||||||| || |||||| || || | ||||| ||| | ||||| || || Sbjct 264594 GCCGCGGGGACCC-CGCGCCCGCAGCTGAGCAGCTGTTTCTTGGTGGCCATGAAGGACGA 264652 Query 7740 CAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGG 7799 ||| ||||| ||||| ||| ||||||| | ||||||| || ||| | || Sbjct 264653 CAGTATCGAAGGCATCTACGACACGCTCAAGGCGTGCGCCATGATCAGCAAGAGTGCGGG 264712 Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859 ||| || || || ||| | || || | |||||||| || ||||| | ||| || Sbjct 264713 CGGTATTGGCCTTAACATTCACAACATCCGCGCCAAGGGCTCGTACATCGCGGGCACGAA 264772 Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919 ||| | | ||| | | ||||||| |||||| |||| || ||| ||| | || Sbjct 264773 CGGCGTGTCGAACGGGCTCGTGCCCATGCTGCGCGCGTTCGATTCGACGGCGCGCTACGT 264832 Query 7920 AGACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976 ||||| || || || |||| ||||| ||||||||| | |||||||||||| | Sbjct 264833 GGACCAAGGCGGCAACAAGCGCCCGGGCGCGTTTGCCATCTACCTCGAGCCGTGGCACCC 264892 Query 7977 GGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCG 8036 |||||| | || | | || | ||||| ||| || ||||| | ||||| Sbjct 264893 GGACATCTTCGAATTCCTCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCGCG 264952 Query 8037 CGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGC 8096 || || |||| || | ||| | ||||| || || |||| |||||| | |||| Sbjct 264953 GGACCTGTTCTACGCGCTCTGGATTCCCGACCTATTCATGAAGCGCGTCGAGGCGAACGC 265012 Query 8097 ACAATGGTCGCTCATGTGCCC 8117 | |||||| || | ||||| Sbjct 265013 GGATTGGTCGTTCTTCTGCCC 265033 >seq524 Length=649165 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || |||||| ||||| || || ||||||||| || ||| | ||| ||||| Sbjct 612710 AGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGAGT 612769 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || ||||| | ||||||||| |||||||| || ||||| || || || ||| Sbjct 612770 TGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGATT 612829 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | || ||||| || || || ||||| || || || || || Sbjct 612830 TTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGCCA 612889 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || |||||||||||||| Sbjct 612890 GTAAGCGTCTTGACGAAAATTTGCAT 612915 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| |||||| ||||| ||||||||||||||| | ||| || ||| || | Sbjct 613215 CGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTA 613274 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| ||||| || || |||| ||||||||| |||||||| ||||| || || || || | Sbjct 613275 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGA 613334 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGAC-GAT-TCCACGTCGAGAGTAATGGTTTT 134683 | || ||||| || | ||||| || | | || || || || || || || || Sbjct 613335 TCTTGGCCTTGACATTATCGATAGTGTC--ACTGCTCTCGACCTCCAGGGTGATCGTCTT 613392 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 613393 GCCCGTCAGCGTCTTCACGAAGATCTGCAT 613422 >seq57 Length=599116 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| || |||||||| || || ||| | || ||| Sbjct 467696 ACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCG 467755 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | |||||||| || || || ||||| || || || || Sbjct 467756 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGG 467815 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | ||||||||||| || || || || || || || || Sbjct 467816 ATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTG 467875 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || |||||||| |||||||| Sbjct 467876 CCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| |||||||||||||| Sbjct 468191 CCGCCACGGAGACGAAGGACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 468250 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| ||||| |||||||| | || ||||| |||||||| Sbjct 468251 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGG 468310 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||| || || ||||| Sbjct 468311 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACC 468370 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | || || || || || ||||| Sbjct 468371 TCCAACGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 468417 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| ||||| || |||||||| ||||| || |||||||| || || ||| | | Sbjct 467462 CGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCG 467521 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | ||| ||||| || || || | |||||||| ||||| || ||||| || || Sbjct 467522 TCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTA 467581 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || ||||| || | ||||||||||| || || || | || || Sbjct 467582 TCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATC 467641 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || | || || ||||| || ||||| Sbjct 467642 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 >seq101 Length=461416 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 22176 GTTGACGATGCTGTCGGCGGCGGCGAAAAACGCCAAAATATGCTTTAAAAAATAGCGTTC 22235 ||||||||||| ||||| |||||||| ||||| | ||||| | |||| ||| || Sbjct 403485 GTTGACGATGCCGTCGGACGCGGCGAAGAACGCGAGGATATGGGAGATGAAATGGCGCTC 403426 Query 22236 GCTGTCGTCCAGTTTGTTGTCCCAATCGTGCTTGTCGCGCGACATGTCCACCTCTTCCAC 22295 | |||||| |||||||| ||||| |||||| ||| |||| ||||| ||||||| | Sbjct 403425 GTTGTCGTTGAGTTTGTTCTCCCAGTCGTGCGCGTCCTTGGACAGGTCCATCTCTTCCGC 403366 Query 22296 TTTCCA 22301 |||| Sbjct 403365 GGTCCA 403360 >seq48 Length=83013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 8500 ATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGC-GTATCGAACATGCGCCACAG 8558 ||||| || || || | || ||| || || |||||| | | | |||||||||||| | Sbjct 60600 ATCATCGACGTGAACTACTACCCCGTGCCCGAGGCGCGCCGCAGC-AACATGCGCCACCG 60658 Query 8559 ACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTA 8618 ||| | ||| | |||||||| ||||| || |||||||| || ||||||| || | Sbjct 60659 GCCCATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATGATCCTGCGCCTGCCGTT 60718 Query 8619 CGAAAGCCAAGAAGCGCGCATGCTCAAC 8646 ||| |||| || ||||||| ||||||| Sbjct 60719 CGACAGCCCCGAGGCGCGCAAGCTCAAC 60746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395026465680