Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq524 93.3 4e-14 seq57 91.5 1e-13 >seq524 Length=649165 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||| | |||| |||| || ||||| || |||||| | Sbjct 613232 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGCTGCTTGCCGGCGAAG 613291 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || |||||||| || || ||||| | ||||| || || ||||||| || | | Sbjct 613292 ATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTA 613351 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| || || || || || || || | ||||||||||| || ||||| Sbjct 613352 TCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCCGTCAGCGTCTTCACG 613411 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 613412 AAGATCTGCAT 613422 >seq57 Length=599116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 27085 TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACAC 27144 |||| ||||||||||||| || |||||| ||||||| ||||| || || ||||| | | Sbjct 468027 TGCGACCGTCTTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGCGGGATGC 468086 Query 27145 CCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTA 27204 | || || || |||||| |||| | | || | ||||| | | || || || | Sbjct 468087 CTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCA 468146 Query 27205 GAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || | ||||||||||| || || || ||||||||||| Sbjct 468147 GCGTGATGGTCTTGCCCGTCAGTGTCTTGACGAAGATTTGCAT 468189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931634473808