Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq379 96.9 1e-14 seq101 87.8 6e-12 >seq379 Length=286460 Score = 96.9 bits (106), Expect = 1e-14 Identities = 198/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 254809 CAGCTGCTACCTACTGACCATCAGTGAAGACAGTATCCAAGGCATCTTCGAAACGCT-AT 254867 |||||| | | | || |||| | || ||||||||| ||||||||| ||| ||||| | Sbjct 264623 CAGCTGTTTCTTGGTGGCCATGAAGGACGACAGTATCGAAGGCATCTACGACACGCTCAA 264682 Query 254868 CGCGATGCGCATTCGTGAGTCAATCGAGCGG-CGGCGTGGGACTCAACATCTCCAACGTG 254926 ||| ||||| | | || ||| | |||| ||| | || || ||||| |||| | Sbjct 264683 GGCG-TGCGCCATGATCAG-CAAGAGTGCGGGCGGTATTGGCCTTAACATTCACAACATC 264740 Query 254927 CGCGCCAGCGGCACACCGATTCGCTCG-ACGAACGGACGGAGCGG-CGGCATTATACCAA 254984 ||||||| ||| | || ||| | |||||||| || || ||| | | || | Sbjct 264741 CGCGCCAAGGGCTCGTACAT-CGCGGGCACGAACGG-CGTGTCGAACGGGCTCGTGCCCA 264798 Query 254985 TGATCCGTGTGTTCAA--CAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGCCC 255042 || | || | |||| | | ||| || |||||||| || ||||| ||| ||| ||||| Sbjct 264799 TGCTGCGCGCGTTCGATTCGACG--GCGCGCTACGTGGACCAAGGCGGCAACAAGCGCCC 264856 Query 255043 AGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || ||||| |||||||||| |||||||||||| | ||||| Sbjct 264857 GGGCGCGTTTGCCATCTACCTCGAGCCGTGGCACCCGGACAT 264898 >seq101 Length=461416 Score = 87.8 bits (96), Expect = 6e-12 Identities = 122/170 (72%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| || |||| || || | ||||| || | || || |||||| ||| Sbjct 403788 TTCGGCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGCATTTTCTTCAGCGGCTCCTTC 403847 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || |||||||||||| | || ||||| || || |||| || || ||||| ||||| Sbjct 403848 -GCGTCCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCGGGCCTCACCTTCTCCAACGA 403906 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || ||| || |||||||| |||| |||||||||||| | |||| Sbjct 403907 GCTCATCTCGCGCGACGAGGGCATGCACACCGACTTCGCCTGCTTGCTCT 403956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588325132803630