Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq379 122 1e-22 >seq379 Length=286460 Score = 122 bits (134), Expect = 1e-22 Identities = 477/742 (64%), Gaps = 25/742 (3%) Strand=Plus/Minus Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 || |||||||| |||||| | ||| || || || |||| | | |||||| || | | Sbjct 265204 GCGTCCTTGTACAGCATGAACGGCCCACCGGTTTCGATCTGCGCCTCGAGAATGGCGTAC 265145 Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGT 111471 || | | || ||| | || ||| | || || || |||||| |||||| | Sbjct 265144 CACAGCTTCTGCGCCGGG----ATGACCTTCCGCGCGCGACCCTCCTTCTCGTAGCGTTC 265089 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 ||||| || |||||||| | | | | ||| ||||| ||||||| || || || Sbjct 265088 ATAGAGCGCCTCAAACTCGGCGCTGTGCACCTCGTGCAGACCCGGTGCCTCGTTCGGGCA 265029 Query 111532 GAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 ||| | ||||| | || | ||| ||| || ||||||||||| ||||| |||||||| Sbjct 265028 GAAGAACGACCAAT--CCGCGTTCGCCTCGACGCGCTTCATGAATAGGTCGGGAATCCAG 264971 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 || | | || || || | || ||||||| | || ||||| || | || Sbjct 264970 AGCGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCG 264911 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709 ||||| || | ||| |||| |||||| ||||| || |||| || | | ||| | Sbjct 264910 AGGAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTAGATGGCAAACGCGCCC---GGG 264854 Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 ||| || |||| | || |||||||| || | | || |||| ||||| || Sbjct 264853 CGCTTGTTGCCGCCTTGGTCCACGTAGCGCGCCGTCGAATCGAACGCGCGCAGCATGGGC 264794 Query 111764 ATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACAT 111821 | | || | || || || || ||| ||| |||||| ||||| | | | Sbjct 264793 ACGAGCCCGTTCGACACGCCGTTCGTGCCCGCGATGTACGAG--CCCTTGGCGCGGATGT 264736 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 || |||| | |||||||| || || | ||| ||| || ||| || | || | Sbjct 264735 TGTGAATGTTAAGGCCAATACCGCCCGCACTCTTGCTGATCATGGCGCACGCCTTGAGCG 264676 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | ||||| || | ||| ||| ||||| |||| | | ||| || ||| || || Sbjct 264675 TGTCGTAGATGCCTTCGATACTGTCGTCCTTCATGGCCACCAAGAAACAGCTGCTCAGCT 264616 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001 |||| | || || || || ||| || || |||| ||||| |||| | || || Sbjct 264615 GCGGGCGCGGGGTCCCCGCGGCGAATAGTGTCGGTGACGCGTGCGTGAAGTAGCGTTCGG 264556 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| || ||| |||| | | | || ||||| ||||||||||| | ||||| Sbjct 264555 ACATCAGGTTGTAAGTCTGGATGGCGCGCTCGATGTCGCGTCCGTGGATGCCCACTGCGA 264496 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||||| ||| | ||| || Sbjct 264495 CGCGCATGAGCATCTGCTGAGG 264474 Score = 86.0 bits (94), Expect = 8e-12 Identities = 175/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 ||||||| | || || || || ||| ||| ||| ||| ||| | | || || Sbjct 220167 TGGATGTTGAGGCCGATGCCGCCGGCCGTCTTGCTGATCATCGCGCACGTCTTGAGCGTG 220226 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | ||||| || | ||| ||||||||||| | | || ||||||||| ||| || |||| Sbjct 220227 TCGTAGATGCCCTCGATCGAGTCCTCCTTCATCGTGACAAGGAAGCAGCTGCTCAGCTGC 220286 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 112003 || || || || || |||||||| || || | ||||| |||| | | |||| Sbjct 220287 GGATGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAAGCGTGCGTGAAGTAGCGCTCGGAC 220346 Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063 ||| || ||| ||||| | | || | ||| | ||||||||||| | || || Sbjct 220347 ATCAGGTTGTACGTCTCGATCGCGCGCTCGACGTCCGCGCCGTGGATGCCCACCGCCACG 220406 Query 112064 CGCATGAACATGTACTGTGG 112083 ||||||| ||||| ||| || Sbjct 220407 CGCATGAGCATGTGCTGCGG 220426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027807886400