Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq101 125 9e-24 seq379 114 2e-20 seq124 86.0 8e-12 >seq101 Length=461416 Score = 125 bits (138), Expect = 9e-24 Identities = 347/525 (66%), Gaps = 8/525 (2%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||||||||||||||||| ||||| || | || ||| | ||||| || || || Sbjct 404224 ACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATGAAGTCGAAG 404165 Query 129797 GGGTTCTTTGAGTTCCAAATTGCTGGCACT--CCAATCTGTTTGAGGAGACGATCCGAGA 129854 || ||| ||||| | |||| | || | | ||| || || || | || Sbjct 404164 GGATTCGACGAGTTGTAG--TGCTTCTCGTTGCCGAGCGCGACGAGCAGGCGGTCGGCGA 404107 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTACATGGGAGC 129913 || |||| || |||| |||| | |||||||| |||||||| | || |||||| Sbjct 404106 CGAACTCGATATACTGGTTCATCAATTTCGAGTTCATGCCGATGAGCGAGACG-GGGAGC 404048 Query 129914 GCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTC 129973 ||||| || |||| ||| ||| || | ||| || ||| | ||| | | | | ||| Sbjct 404047 GCGTCGGTGAGGAACTCCTGCTCGATCTTCACGGCCTCCGTGATGATCGTGCGGACGGTG 403988 Query 129974 TCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033 || | | || | ||||| | | | |||||| ||| || || ||| | Sbjct 403987 TCGGGGTGCGGGCGTTTGCGGAGATGCGAGAAGAGCAAGCAGGCGAAGTCGGTGTGCATG 403928 Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| || |||||||| || || |||||| || || ||||| || || |||||| Sbjct 403927 CCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATCAGGCCGCGCTTC 403868 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | || ||||| |||||| || ||||| || ||||| Sbjct 403867 TTGAGCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAAATGCCCTCGACGGCGGCGAAG 403808 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212 || | ||| ||||| | || | || | | |||| | | ||| || |||||||| Sbjct 403807 GCGATGAGGCGCTCGCCGAAAG-TCGAGTCCTTGTCGGATATCCAGCGCAGCGCCCACTC 403749 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||||| || ||| ||||||| ||||| ||| || || ||||| Sbjct 403748 GGCCTTGCGCTTGATGCACGGGATGGTCTCGATGGCATCGAAGAG 403704 >seq379 Length=286460 Score = 114 bits (126), Expect = 2e-20 Identities = 434/673 (64%), Gaps = 15/673 (2%) Strand=Plus/Minus Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || |||||||| |||||| | ||| || || || | || | || |||||| || | | Sbjct 265204 GCGTCCTTGTACAGCATGAACGGCCCACCGGTTTCGATCTGCGCCTCGAGAATGGCGTAC 265145 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCCCCTCTTCCTCGTACTTTGT 118945 || | | || || || || | || | || || || ||||| | |||||| | Sbjct 265144 CACAGCTTCTGC-GCCGGGA---TGACCTTCCGCGCGCGACCCTCCTTCTCGTAGCGTTC 265089 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 ||||| || |||||||| | | |||| || || ||||||| | ||||| Sbjct 265088 ATAGAGCGCCTCAAACTCGGCGCTGTGCACCTCGTGCAGACCCGGTGCCTCGTTCGGGCA 265029 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 ||||| ||||| | | | |||| || ||||||||||| ||||| || |||||||| Sbjct 265028 GAAGAACGACCAATCCGCGTTCGCCTCGACGCGCTTCATGAATAGGTCGGGAATCCAGAG 264969 Query 119066 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 ||| |||| || ||||| ||| | ||||| | || || || |||| || | Sbjct 264968 CGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGAG 264909 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG--- 119182 || || | ||| |||| ||||||||| || ||||| | || | | ||| || Sbjct 264908 GAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTAGATGGCAAACGCGCCCGGGCGCTT 264849 Query 119183 ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242 || | |||| || || | ||| || | | || | || ||||| || | || Sbjct 264848 GTTGCCGCCTTGGTCCACGTAGCGCGCCGTCGAATCGAACGCGCGCAGCATGGGCACGAG 264789 Query 119243 ACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGG 119300 || | || ||| || || ||| ||| |||||| | ||||| | || | ||| Sbjct 264788 CCCGTTCGACACGCCGTTCGTGCCCGCGATGTACGAGCC--CTTGGCGCGGATGTTGTGA 264731 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 |||| | |||||||| || || | ||| ||| |||||| || |||| || || Sbjct 264730 ATGTTAAGGCCAATACCGCCCGCACTCTTGCTGATCATGGCGCACGCCTTGAGCGTGTCG 264671 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || ||||| ||| |||| | || | | ||| ||||| || || || Sbjct 264670 TAGATGCCTTCGATACTGTCGTCCTTCATGGCCACCAAGAAACAGCTGCTCAGCTGCGGG 264611 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480 | || || || ||| ||| || || |||| |||||| |||| | || ||||||| Sbjct 264610 CGCGGGGTCCCCGCGGCGAATAGTGTCGGTGACGCGTGCGTGAAGTAGCGTTCGGACATC 264551 Query 119481 TTGTCGTAGGTCT 119493 || ||| |||| Sbjct 264550 AGGTTGTAAGTCT 264538 Score = 91.5 bits (100), Expect = 2e-13 Identities = 331/511 (65%), Gaps = 9/511 (2%) Strand=Plus/Plus Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 || || || || ||||||||||| ||||||| || || ||| | || || | || Sbjct 219912 AAAAGATCGGGAATCCAGAGCGCATAGAAGAGGTCGCGCGCGCGGACCTCCTCTTTGCCG 219971 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 119165 || || |||| || | ||||| | | ||||| |||||||| || | ||| | | Sbjct 219972 TGGTTCTTGCGCAGGTCGAGGAAGTCGAACACGTCCGCATGCCACGGCTCGATGTAAATC 220031 Query 119166 GCGATTGACCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAAT 119222 |||| | || ||| ||| |||||| ||||| | ||| || | || | Sbjct 220032 GCGAACGCGCCGGGACGCTTGTTACCGCCCTGGTCGACATAGCGCGCCGTCGAGTCGTAC 220091 Query 119223 ACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC-CGAA-TACGAGACT 119280 | || ||||| || | ||| || | | ||||| || || ||| ||| |||||| | Sbjct 220092 GCGCGCAGCATGGGCACGATGCCGTTGCTGTGGCCGTTCGTGCCCGCGATGTACGAGCCC 220151 Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340 | | || | | |||||||| | || || || || ||| ||| ||| || Sbjct 220152 T--TCGCGCGAATGCAGTGGATGTTGAGGCCGATGCCGCCGGCCGTCTTGCTGATCATCG 220209 Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400 ||||| | |||| || ||||||| || ||||||||||| |||| | | || |||| Sbjct 220210 CGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATCGTGACAAGGA 220269 Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460 ||||||| || || || || || || ||||||||||| || || | ||||| Sbjct 220270 AGCAGCTGCTCAGCTGCGGATGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAAGCGTGCG 220329 Query 119461 TGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCG 119519 |||| | | ||||||| || ||| ||||| | || || | | ||| | ||| Sbjct 220330 TGAAGTAGCGCTCGGACATCAGGTTGTACGTCTCGATCGCGCGCTCG-ACGTCCGCGCCG 220388 Query 119520 TGAATACCGATCGAGACCCGCATAAACATGT 119550 || || || | || || ||||| | ||||| Sbjct 220389 TGGATGCCCACCGCCACGCGCATGAGCATGT 220419 >seq124 Length=448922 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 12072 GGGAACCTCAACGCCGAGAGGGACTGGGGACATGCCAAGGACTATGTTGAAGCCATGTGG 12131 || |||||| |||| || | |||||||| || ||||||||||| ||||| | ||||||| Sbjct 102256 GGCAACCTCGACGCGAAGCGCGACTGGGGCCACGCCAAGGACTACGTTGAGGGCATGTGG 102197 Query 12132 CTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCC 12191 | | | || || || || || || || | |||| | || || || ||||| ||| || Sbjct 102196 CGCATGCTCCAGCAGGACACCGCCGAGGACTTTGTCCTTGCCACCGGCGAGACCCACCCC 102137 Query 12192 GTCAGGGAGTTCGTTGA 12208 ||| | ||||| || || Sbjct 102136 GTCCGCGAGTTTGTCGA 102120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431071945040