Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq379 111 2e-19 seq101 100 3e-16 seq124 91.5 2e-13 >seq379 Length=286460 Score = 111 bits (122), Expect = 2e-19 Identities = 472/739 (64%), Gaps = 19/739 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| |||||||||| || | || || || || ||||| || | | Sbjct 264474 CCTCAGCAGATGCTCATGCGCGTCGCAGTGGGCATCCACGGACGCGACATCGAGCGCGCC 264533 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | |||| ||| || ||||||| || | |||| ||||| |||| || || ||| Sbjct 264534 ATCCAGACTTACAACCTGATGTCCGAACGCTACTTCACGCACGCGTCACCGACACTATTC 264593 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || | || || || ||| || ||| | | |||| ||||| ||| Sbjct 264594 GCCGCGGGGACCCCGCGCCCGCAGCTGAGCAGCTGTTTCTTGGTGGCCATGAAGGACGAC 264653 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 ||| | || ||||| | || || | || ||| || ||| ||| | || || Sbjct 264654 AGTATCGAAGGCATCTACGACACGCTCAAGGCGTGCGCCATGATCAGCAAGAGTGCGGGC 264713 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAA 104519 |||||||| | |||| || | | | ||||| |||||| ||| ||| || | Sbjct 264714 GGTATTGGCCTTAACATTCACAACATCCGCGCCAAGGG--CTCGTACATCGCGGGCACGA 264771 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || || | || | | || ||||| |||| || | | || |||||||| | Sbjct 264772 ACGGCGTGTCGAACGGGCTCGTGCCCATGCTGCGCGCGTTCGATTCGACGGCGCGCTACG 264831 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | |||| || ||| | ||| | | || |||| || ||||| |||| Sbjct 264832 TGGACCAAGGCGGCAACAAGCGCCC---GGGCGCGTTTGCCATCTACCTCGAGCCGTGGC 264888 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || |||| ||| | || ||||| || |||| ||||| || | || |||| || Sbjct 264889 ACCCGGACATCTTCGAATTCCTCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCG 264948 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || || |||| ||| ||||||||||| || || ||||||||| | || |||| || Sbjct 264949 CGCGGGACCTGTTCTACGCGCTCTGGATTCCCGACCTATTCATGAAGCGCGTCGAGGCGA 265008 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 | ||||||| |||| || || || ||||||| ||||| ||| | | | Sbjct 265009 ACGCGGATTGGTCGTTCTTCTGCCCGAACGAGGCACCGGGTCTGCACGAGGTGCACAGCG 265068 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT-- 104871 |||||||| || || || | |||||| | || ||||| ||| || ||| Sbjct 265069 CCGAGTTTGAGGCGCTCTATGAACGCTACGAGAAGGAGGGTCGCGCG---CGGAAGGTCA 265125 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || | || || | ||||| | || |||||| || | || | ||| || ||| || | Sbjct 265126 TCCCGGCGCAGAAGCTGTGGTACGCCATTCTCGAGGCGCAGATCGAAACCGGTGGGCCGT 265185 Query 104931 ACATGCTTTACAAAGACGC 104949 |||||| ||||| ||||| Sbjct 265186 TCATGCTGTACAAGGACGC 265204 >seq101 Length=461416 Score = 100 bits (110), Expect = 3e-16 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCT 94767 |||| ||||| || |||||| | || | ||||| || ||| | ||| | || ||||| Sbjct 403699 AGCACCTCTTCGATGCCATCGAGACCATCCCGTGCAT-CAAGCGCAAGGCCGAGTGGGCG 403757 Query 94768 ATGAAGTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTG 94826 || ||| | | |||| | | || | || | ||||| ||| |||| || || Sbjct 403758 CTGCGCTGGATATCCGACAAGGACTCGA-CTTTCGGCGAGCGCCTCATCGCCTTCGCCGC 403816 Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAG 94885 || ||||| || |||||| || |||||| ||| | || | |||||||||||||| | Sbjct 403817 CGTCGAGGGCATTTTCTTCAGCGGCTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCG 403875 Query 94886 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 | || ||||| || ||| ||||||||||||||| ||||| || |||||||| Sbjct 403876 GCCTGATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGG 403927 >seq124 Length=448922 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCT-GCGC 94862 ||||| ||| | || || || ||||| || || |||||| || |||||| | || Sbjct 288976 GAGCGCCTCATTGCCTTCGCCGCCGTTGAAGGCATTTTCTTCAGCGGCTCCTTCGCGAGC 289035 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | ||||||||||||||||| |||||||| || || |||||||||||||| || Sbjct 289036 -ATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCCGGCCTGACGTTCTCCAACGAGCTCAT 289094 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 ||| || |||||||| | ||| || |||||| Sbjct 289095 CTCGCGCGACGAGGGCATGCACACCGACTTTGCG 289128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256906734160