Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq524 111 5e-19 >seq524 Length=649165 Score = 111 bits (122), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| || || ||| || || || || |||||||| | || || ||||| || || Sbjct 613502 AGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGC 613561 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || ||||||||||| || || ||||| || || || || || || || ||||| || Sbjct 613562 TGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613621 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGG-TTCAACTTCAAGTGTAACTGTCTTTCC 140710 || || || |||||||| || | || | ||| || || || || || | ||||| || Sbjct 613622 TTGGCCTTGACATTATCGATGGTGTC-GCTGGACTCGACCTCGAGCGTGATGGTCTTGCC 613680 Query 140711 GGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||| || || || ||||| ||||||||| Sbjct 613681 GGTGAGGGTCTTGACAAAGATCTGCATT 613708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515244032818802