Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq524 89.7 4e-13 >seq524 Length=649165 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/213 (71%), Gaps = 7/213 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || || |||||||| || || || | || ||||| | || Sbjct 612915 ATGCAAATTTTCGTCAAGACGCTTACTGGCAAGACAATCACGCTCGAGGTCGAGTCCTCC 612856 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| |||| ||||| ||||| ||||| ||||| | ||| || | Sbjct 612855 GATACGATCGACAA--CGTCAAGGCGAAAATCCAGGACAAGGAAGGAATCCCGCCCGACC 612798 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 |||| || | ||||| ||||| || ||| | || |||| |||| |||| ||||| ||| Sbjct 612797 AGCAGCGTCTTATTTTCGCCGGCAAGCAACTCGAGGACGGGCGCACGCTT-TCCGACTAC 612739 Query 27967 AACATCCAAAAAGAGAGCACTTTGCAT-TTGGT 27998 || ||||| || |||||||| ||||| ||||| Sbjct 612738 AATATCCAGAAGGAGAGCACGCTGCATCTTGGT 612706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860084003018