Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq57 179 9e-40 seq524 149 1e-30 seq379 93.3 1e-13 seq190 93.3 1e-13 >seq57 Length=599116 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| ||||||| ||| || | ||||| Sbjct 467693 AGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 467752 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||||||||| || |||||||| |||| || ||||||||| Sbjct 467753 TCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCC 467812 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| ||||| ||||| || || ||||| || ||||||||| Sbjct 467813 TGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTC 467872 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | ||||| Sbjct 467873 TTGCCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Score = 178 bits (196), Expect = 3e-39 Identities = 164/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| ||||| ||||| || ||||||||||| |||| ||| || | || ||||| | Sbjct 467982 CAAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTTCGA 468041 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| ||||| || ||||| || ||||| || || | |||||||||||||||| Sbjct 468042 GCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGGA 468101 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| |||||||| ||||||||||| || || ||||| || ||||| ||||| | Sbjct 468102 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCTTGC 468161 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || ||||| || || | ||||| Sbjct 468162 CCGTCAGTGTCTTGACGAAGATTTGCAT 468189 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || || ||||| || |||| || || | || ||| Sbjct 468206 AGGACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCGTCT 468265 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || |||||||| ||||| || || | || ||||||||| Sbjct 468266 TCGAGCTGCTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 468325 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| ||| || ||||| | ||||| ||| Sbjct 468326 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTC 468385 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | |||||| Sbjct 468386 TTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 468417 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || |||||||| ||||||| ||| || | || || Sbjct 467465 AGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 467524 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| ||||| || ||||| ||||| | || ||||| ||| Sbjct 467525 TCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 467584 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| || ||||| || | ||||||||| Sbjct 467585 TGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATCGTC 467644 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 467645 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||| || ||||||||||| |||| ||||| | ||||| Sbjct 468434 AGGACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAGTCCGACAGGGTGCGACCATCC 468493 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 || ||||||||||| ||||||||||| || || || || ||||||| || Sbjct 468494 TCGAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGATCCGGAGGAATTC 468542 >seq524 Length=649165 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || || || ||| ||| || |||||||| ||||| | || || | ||||| || ||| Sbjct 613502 AGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGC 613561 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| || ||||| ||||| || ||||| || || | || ||||||||||||||| Sbjct 613562 TGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613621 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || || ||||||||||| | || |||||||| ||||| ||||| || Sbjct 613622 TTGGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCG 613681 Query 211089 GTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| ||||| | ||||||| Sbjct 613682 GTGAGGGTCTTGACAAAGATCTGCATT 613708 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| || ||| ||| || || ||||| || || | || || | || || || ||| Sbjct 613217 AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCTAGC 613276 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| |||||||| || || || ||||| || || | || ||||||||||||||| Sbjct 613277 TGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613336 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || || ||||| |||||| ||| || ||||| || ||||||||||| ||| Sbjct 613337 TTGGCCTTGACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTGATCGTCTTGCCC 613396 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | |||||| Sbjct 613397 GTCAGCGTCTTCACGAAGATCTGCAT 613422 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || ||| ||| || ||||| || || || | ||| || | || || || | Sbjct 612708 CAAGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGA 612767 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | |||||||| ||||| ||||| || || ||||| || || | ||||||||||||||||| Sbjct 612768 GTTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGA 612827 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 | || || ||||| ||||| || || ||| || |||||||| ||||| ||||| | Sbjct 612828 TTTTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGC 612887 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| || || | ||||| Sbjct 612888 CAGTAAGCGTCTTGACGAAAATTTGCAT 612915 >seq379 Length=286460 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || |||||||| || |||| || |||| || || Sbjct 273228 AGGACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTCCGGCCGTCC 273169 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||||||||| || ||||| ||||| || ||||| || || Sbjct 273168 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGCGG 273125 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/107 (79%), Gaps = 6/107 (6%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACC 211067 |||||||||||||||||||| || || || ||||||||||| ||| || ||| Sbjct 273005 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTC---GCTCGACTCGACC 272949 Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| ||||| |||||||| ||||| | |||||| Sbjct 272948 TCGAGCGTGATGGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 272902 >seq190 Length=372578 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || ||||| |||||||| |||||||| || |||| || || | || || Sbjct 156973 AGGACCAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCC 156914 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| ||||| || |||||||| || Sbjct 156913 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGG 156870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144069226910