Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq124 89.7 4e-13 >seq124 Length=448922 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/240 (69%), Gaps = 3/240 (1%) Strand=Plus/Minus Query 4258 TTTG-GTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||| ||| ||||| || ||||| |||||||| || || ||||| | | ||| || | Sbjct 289421 TTTGCGTAGTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATG 289362 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| || || || ||||| | | |||||| || || || || || || || Sbjct 289361 TCCATGAAGTCGAAGGGATTCGACGAGTTGTAGTGCTTCTCGTTGCCGAGTGCGACGAGG 289302 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAG-TTCGCAGTTAATTCCAATTAA 4435 | ||||| || || || || || |||||| |||| || |||| |||| || || || | Sbjct 289301 AGGCGGTCCGCGACGAACTCGATGTACTGGTTCATCAGCTTCG-AGTTCATGCCGATGAG 289243 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || || ||||||| || | ||||| || || || | || ||||||||||| || Sbjct 289242 GGAGACGGGGAGCGCGTCCGTGAGGAACTCCTGCTCGATCTTCACAGCTTCTGTGATGAT 289183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046820707822