Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq112 102 6e-17 >seq112 Length=929211 Score = 102 bits (112), Expect = 6e-17 Identities = 209/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 27008 TCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGT 27067 ||||| |||| ||||| || | |||||| || | | | || || || ||||| |||| Sbjct 920072 TCATCTCGATGGTGGGATACGGCTTGTAACCTTCAACGCAAAAGTCTTCCGCCTTGAAGT 920131 Query 27068 CGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCT 27127 |||| | ||| ||| || | ||| || | || |||||||| || | || | || Sbjct 920132 CGTCAATGCTGGTCACGCTACGGTTAATGCGTAGAGTGGGAAAAGGCCGAGGGGTGCGCT 920191 Query 27128 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG-GGTG 27186 |||||| || | | | || |||||||| |||| ||||| ||||||||||| | Sbjct 920192 GGAGCTGTGTTTGTAAGGCGTCGACGTGATCGCGGTATACGTGCGCGTCTCCCAGCTGAA 920251 Query 27187 TGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAG 27246 | || | ||| |||||| |||| || || || |||||| | |||||||| | | Sbjct 920252 TTGA-GAGCTCGTGCGGTTCAGTATCGGTCACATGGGCGATCATGCAGGTGAGGAGCGCG 920310 Query 27247 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGA 27306 ||| ||||| || || || | ||||| |||| ||| | || | ||| || | || Sbjct 920311 TAGGATGCGATATTGAATGGAATGCCGAGTCCCAGGTCAGCGGAGCGCTGATACATGAGA 920370 Query 27307 CACGAGAG 27314 ||||| || Sbjct 920371 CACGAAAG 920378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504795200954