Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq57 185 2e-41 seq524 170 4e-37 seq190 96.9 7e-15 seq346 95.1 3e-14 seq101 87.8 4e-12 seq379 84.2 5e-11 seq124 84.2 5e-11 >seq57 Length=599116 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| ||||| || ||||| | || || || ||||||||||| || | | Sbjct 467678 CCGCCGCGCAGACGAAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGAA 467737 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||||||||| | || || |||||| ||| Sbjct 467738 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGTGGA 467797 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| ||||| ||| | ||||| ||||| || | ||||| Sbjct 467798 ATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTGTCGATCGTGTCGGACGACTCGACC 467857 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | |||||||||||||| ||||| Sbjct 467858 TCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAACGAATATTTGCAT 467904 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||| ||| || || ||||| | |||| || || ||||||||||| || | Sbjct 467449 ACCGCCACGCAAGCGCAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGA 467508 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| | || || ||||| ||||| | || || ||||| || Sbjct 467509 AAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 467568 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| || || ||| |||| || ||||| || | || || Sbjct 467569 GATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAAC 467628 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || |||| ||||| ||||| |||||||| Sbjct 467629 TTCCAACGTGATCGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 467676 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | || || || || ||||||||||| | Sbjct 468191 CCGCCACGGAGACGAAGGACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 468250 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || || || || || || |||||||| || | ||||| ||||| ||| Sbjct 468251 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAAATGAGGCGTTGCTGGTCGGGCGGG 468310 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || || | ||||| |||||||| | || || Sbjct 468311 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACC 468370 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| || || |||||||| Sbjct 468371 TCCAACGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 468417 Score = 104 bits (114), Expect = 5e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || || ||||||| |||||||| | ||||| ||| Sbjct 468598 CCCTCCTTGTCCTGGATCTTGGCCTTAACATTATCGATCGTGTCCGAGGACTCGACCTCG 468657 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 || ||||| ||||| || |||| |||||| ||||| |||||| Sbjct 468658 AGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGC 468699 >seq524 Length=649165 Score = 170 bits (188), Expect = 4e-37 Identities = 168/213 (79%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 282889 GTACC-AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 ||||| || || | |||||| || || || ||||||||||| | || ||||| || ||| Sbjct 613211 GTACCGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCC 613270 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 ||||| || || ||||| ||||||| ||| || ||||| ||| || ||||||||||| Sbjct 613271 TCTAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 613330 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGT 283066 |||||||| || || || |||||||||||| | ||| ||||| || || |||||||| Sbjct 613331 TGGATCTTGGCCTTGACATTATCGATAGTGT-CACTGCTCTCGACCTCCAGGGTGATCGT 613389 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||||| ||||| ||||| |||||||| Sbjct 613390 CTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 613422 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || || || || | |||| || || ||||| ||||| || | Sbjct 612917 CCACCACGCAGGCGCAGAACAAGGTGCAGCGTGGACTCCTTCTGGATATTGTAATCGGAC 612976 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || ||||| ||||| || ||||| || ||||| || || ||||| ||| Sbjct 612977 AGCGTCCGACCGTCCTCGAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCGGGCGGG 613036 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || ||||| || || || ||| | || || |||||||| | |||||| Sbjct 613037 ATCCCCTCCTTATCCTGGATTTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACT 613096 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 613097 TCCAGGGTGATGGTCTTCCCGGTCAACGTCTTGACAAAGATCTGCAT 613143 Score = 167 bits (184), Expect = 5e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 282894 AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGT 282953 ||||| | |||||| || || ||||||||||| |||| ||||||||||||||||| || Sbjct 613502 AGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCTCGAGC 613561 Query 282954 TGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATC 283013 || || || |||||||||| || || ||||| ||| || ||||||||||| |||||| Sbjct 613562 TGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 613621 Query 283014 TTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 || || || || ||||||| ||||| | ||||| ||||| ||||| ||||| || Sbjct 613622 TTGGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCTTGCCG 613681 Query 283074 GTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||| || || ||||||||| Sbjct 613682 GTGAGGGTCTTGACAAAGATCTGCATT 613708 >seq190 Length=372578 Score = 96.9 bits (106), Expect = 7e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||||||| | || ||||| |||||||||||||| | Sbjct 156989 ACCACCACGGAGACGAAGGACCAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCCGA 156930 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| || || |||||| ||| Sbjct 156929 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGG 156870 Query 282992 AAT 282994 || Sbjct 156869 GAT 156867 >seq346 Length=295572 Score = 95.1 bits (104), Expect = 3e-14 Identities = 189/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 273839 ACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCAC 273898 ||| | ||||| ||| ||| | ||| || || || ||| ||||||| |||| || || Sbjct 69274 ACCATTGGGCAAGAGCAGGTTGACGTTATTACTTCCTACGAAATCCTGGGCCAAGTTGAC 69333 Query 273899 GATAGTC---CCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATA 273955 ||| ||| ||| | | | | ||||||||||||||||| |||||||| |||||| Sbjct 69334 GATGGTCATGCCC---AAGCTTGCTTCGCCGTGGTGATAGGCAGCGTGTTCGGAGATATA 69390 Query 273956 ACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAA 274015 |||| || ||| || ||||| | || | | | | || |||||||| || | | Sbjct 69391 ACCAACGAGCTGGGCGACCTTGATCTCTCCCTTGAGCTTGCGCTTGAAGCAAGACCATAT 69450 Query 274016 CACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATACTGCGTTCCAAATC 274075 ||||| || || |||||| | ||| || ||| | || ||||| || | || Sbjct 69451 GACCTTGCGTTGACCGGGCTTCAGCCCGTCGACGGCGGACGGAATGGATCGAACATTGTC 69510 Query 274076 ATACCGAGAGAACAAAATCAGTTCCTTGTCAATGAAGTC 274114 | |||||||| || || ||||||| |||||||| Sbjct 69511 GGCTTGGGAGAACAAGATTAGCTCCTTGTTGATGAAGTC 69549 >seq101 Length=461416 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| | | | ||| || |||||||| ||||| || || || | Sbjct 404061 CTCATCGGCATGAACTCGAAATTGATGAACCAGTATATCGAGTTCGTCGCCGACCGCCTG 404120 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| ||||| || ||||||| || ||||| ||| ||||||| || ||||| Sbjct 404121 CTCGTCGCGCTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGAC 404180 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAG 230401 | || || || ||||| || || ||||||||||| ||||| ||| ||| || | ||| Sbjct 404181 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCCGACTACGCGAAG 404240 Query 230402 GCC 230404 ||| Sbjct 404241 GCC 404243 >seq379 Length=286460 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || || || || | ||| || || |||||||||||||| | Sbjct 273243 CCGCCACGCAGACGGAGGACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAC 273184 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| ||||| || || || ||||||||||||| || || ||||| ||| Sbjct 273183 AGCGTCCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 273124 Query 282993 ATAC 282996 |||| Sbjct 273123 ATAC 273120 >seq124 Length=448922 Score = 84.2 bits (92), Expect = 5e-11 Identities = 129/183 (70%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| | | || ||| || || ||||| ||||| || || || | Sbjct 289243 CTCATCGGCATGAACTCGAAGCTGATGAACCAGTACATCGAGTTCGTCGCGGACCGCCTC 289302 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || ||||||| || ||||| ||| ||||||| || ||||| Sbjct 289303 CTCGTCGCACTCGGCAACGAGAAGCACTACAACTCGTCGAATCCCTTCGACTTCATGGAC 289362 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAG 230401 | || || || ||||| || || ||||||||||| ||||| || ||| || ||||| Sbjct 289363 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGACTACGCAAAG 289422 Query 230402 GCC 230404 ||| Sbjct 289423 GCC 289425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732038341236