Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq524 141 7e-29 seq57 136 3e-27 >seq524 Length=649165 Score = 141 bits (156), Expect = 7e-29 Identities = 164/219 (75%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 44123 CTCAAC--ACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||| ||| ||||| |||||||||||||| || |||||||| |||| ||| ||| Sbjct 613205 CTCAACGTACCGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGA 613264 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 |||| || |||||||| ||||| ||||||| ||||||||| || | || | || ||| Sbjct 613265 CCGTCCTCTAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCC 613324 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | | | || ||||| | || ||||||| || Sbjct 613325 TTGTCCTGGATCTTGGCCTTGACATTATCGATAGTGTCACTGCTCTCGACCTCCAGGGTG 613384 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| ||||| || |||||||||||||| |||||| Sbjct 613385 ATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCATG 613423 Score = 138 bits (152), Expect = 8e-28 Identities = 158/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || || |||||||||||||| |||||||||||||| | ||| ||| | || | Sbjct 613497 CACCGAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCATCCT 613556 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || |||||||||| |||||||| || | || | || ||||| ||| Sbjct 613557 CGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCT 613616 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | ||||||||| ||| || ||||| | ||| || |||| Sbjct 613617 GGATCTTGGCCTTGACATTATCGATGGTGTCGCTGGACTCGACCTCGAGCGTGATGGTCT 613676 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| || ||||| ||||| Sbjct 613677 TGCCGGTGAGGGTCTTGACAAAGATCTGCAT 613707 Score = 125 bits (138), Expect = 5e-24 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || |||||||||||||| ||||| ||||| |||| || |||| |||| || || Sbjct 612710 AGATGCAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGCCCGTCCTCGAGT 612769 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| ||||| || || | ||||||||| || | || | |||||||| ||| || Sbjct 612770 TGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGCGGGATTCCTTCCTTGTCCTGGATT 612829 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | || || |||| ||| || ||||| | ||| || ||||| || Sbjct 612830 TTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCGACCTCGAGCGTGATTGTCTTGCCA 612889 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| ||||| ||||||||| Sbjct 612890 GTAAGCGTCTTGACGAAAATTTGCATG 612916 >seq57 Length=599116 Score = 136 bits (150), Expect = 3e-27 Identities = 158/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| || || |||||| |||||||| || || | || ||| |||| | Sbjct 467979 CACCAAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGAGTGCGACCGTCTT 468038 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| ||||| || || | |||||||| |||| || | |||||||| ||| Sbjct 468039 CGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCT 468098 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | |||||||| | || |||||||||| ||| || |||| Sbjct 468099 GGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATGGTCT 468158 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| || ||||| ||||||||||||||| Sbjct 468159 TGCCCGTCAGTGTCTTGACGAAGATTTGCATG 468190 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || |||||| |||||| |||||||||||||| | || ||| |||| ||| Sbjct 467468 ACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCC 467527 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | |||||||| || | ||| | || ||||| ||| Sbjct 467528 AACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 467587 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| || || || |||| ||| |||||||| Sbjct 467588 ATCTTCGCCTTGACGTTATCAATCGTGTCGGACGACTCAACTTCCAACGTGATCGTCTTG 467647 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| |||||||| |||||| Sbjct 467648 CCAGTCAGCGTCTTGACGAAGATCTGCATG 467677 Score = 129 bits (142), Expect = 4e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | || ||| | || || |||||||| |||||||| Sbjct 467713 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 467772 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||||| || | || | || ||||| ||| |||||| |||| | || Sbjct 467773 GATAAGGCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTC-GCTTTGACGT 467831 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||||| || || ||||||| ||| |||||||| || ||||| ||||| | Sbjct 467832 TGTCGATCGTGTCGGACGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGTGTCTTAA 467891 Query 44325 CGAAGATTTGCAT 44337 |||| |||||||| Sbjct 467892 CGAATATTTGCAT 467904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988057137478