Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq174905 159 4e-34 seq175565 100 3e-16 >seq174905 Length=21728 Score = 159 bits (176), Expect = 4e-34 Identities = 302/440 (69%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || || ||||| ||| || | ||||| || | ||||| || ||||| || Sbjct 16870 AACAAAAGGCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGGAG 16811 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| ||||||||| |||| || ||||| | ||| || || | |||||||||||| Sbjct 16810 AAGGTCAAGCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACCCA 16751 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 |||||||| || ||||| |||| ||||| |||| | ||||| || | || | || Sbjct 16750 GAAAAGAAAATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGT-GGAACT 16692 Query 17135 TTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193 || | || ||||| || | |||| || || || | || ||||| || ||||| Sbjct 16691 CTGGTCGGAGATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGGAATGGTTTC 16632 Query 17194 TATGGCCTTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGT 17251 | || | || | | || | || | | | || | || ||||| |||||||| Sbjct 16631 AACAGCGTCGAACAGGAAGTCGCGTTGAGCGG--GCTCTTTGATGTACGTGTCGATGAGG 16574 Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311 || ||| |||||||||| ||||| ||||| ||||| || || || ||||| || Sbjct 16573 AGAGAGTAGGTTTCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAGAAGCAACGA 16514 Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371 || || || ||| ||||| || |||| ||||| || ||||| || ||||| ||| Sbjct 16513 GCCTCGGCGGCTTGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTGACGATACCG 16454 Query 17372 TCGCTCGCGGCGAAAAACGC 17391 || ||| ||||| || || Sbjct 16453 TCAGACGCCGCGAAGAAAGC 16434 >seq175565 Length=26152 Score = 100 bits (110), Expect = 3e-16 Identities = 247/373 (66%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||||| ||||| || |||| || ||||||||||||||||| ||||| ||| Sbjct 8115 AACACGAGACAGGCGAAGTCAGTGTGTATCCCTTCGTCTCTGCTGATAAGCTCGTTGGAA 8174 Query 17015 AATGTCAACCCGGGC--ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACC 17072 || || | |||||| | |||||| ||||| | |||| |||| | ||| ||||| | Sbjct 8175 AACGTGAGGCCGGGCAAAAGGTTCCTC--TTCTTGAGCCAATATATGGAGGCAAACGAGC 8232 Query 17073 CAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT 17132 || ||| || || ||||| | || || |||| | || |||| | | | | Sbjct 8233 TCGAGAAGTGGATTCCTTCGACACAAGCGAATGCGACGATTCTCGTGGCGAATGAAGAGG 8292 Query 17133 CTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTT 17192 || | | ||||||||| | ||||| | ||||| || ||||| || | | Sbjct 8293 TTTCATCGCCTATCCATTTCAGGGCCCACGCTGCTTTGTGAGCGATGCATGGGATGGACT 8352 Query 17193 CTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252 | || || ||||| | ||| || ||| | |||| | || || || | | || | Sbjct 8353 CGATTGCTTTAAAGAGTTTGTCGCGCTCCGTAACGTCGCTGATGTAGGTTTGTAGAAGGA 8412 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 | || |||||| || || ||||||||||||||||| | |||||| || || | Sbjct 8413 GTGCATATGTTTCGGCATGGATATTCTCCATGGCTATCTGCATTCCGTAGAATGCGCGTG 8472 Query 17313 CTTCCGCTATTTG 17325 | || | |||||| Sbjct 8473 CCTCGGGTATTTG 8485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516365020262520