Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq174905 161 1e-34 seq175565 86.0 6e-12 >seq174905 Length=21728 Score = 161 bits (178), Expect = 1e-34 Identities = 372/560 (66%), Gaps = 3/560 (1%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||| ||| ||| | ||| || |||| |||||| ||||| || ||||| ||| Sbjct 14667 AGGCAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTT 14726 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 || || ||||| || || ||||||| ||| ||||| | ||| || || || || ||| Sbjct 14727 AAGCCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAG 14786 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || || || || || | |||||||||| || || || || | || | ||| | | Sbjct 14787 AAGATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCA 14846 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 ||||| || | ||||||| || || | || || ||| || || |||||||| Sbjct 14847 GATATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCG 14906 Query 16439 TTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTAC 16498 | ||| | | |||| ||| | || | || || || || || || | || Sbjct 14907 TCAAATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAG 14966 Query 16499 ATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCT 16558 | |||| ||| | |||||| || || ||||| |||||||| || || || || || Sbjct 14967 GTCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCG 15026 Query 16559 ATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCA 16618 | ||||||||| | | || |||| | || || ||||| |||||||||||| || Sbjct 15027 ACTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCG 15086 Query 16619 GCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA---ATATGC 16675 ||||| || || | ||||| ||| |||| ||||| | ||| | | | Sbjct 15087 GCAAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTC 15146 Query 16676 CAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCC 16735 || || ||| || | |||| ||||| |||||| | |||||||| ||| | ||| Sbjct 15147 CAGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCC 15206 Query 16736 TTTTTATACATTTTCCAAAT 16755 || || ||||| | ||| || Sbjct 15207 TTCTTGTACATCTGCCAGAT 15226 Score = 149 bits (164), Expect = 6e-31 Identities = 295/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Minus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 ||||| | |||| || || ||||||||| || | || || || | ||||| || Sbjct 16879 AGGTGGCTGAACAAAAGGCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGC 16820 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 |||||||| || || || || ||||| |||| || ||||| | |||||| || | || Sbjct 16819 TCGTTGGAGAAGGTCAAGCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCG 16760 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || ||||| |||||||| || |||||||| | ||||| |||| | ||||| || | Sbjct 16759 AACGACCCAGAAAAGAAAATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAA 16700 Query 16364 GTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATC 16422 || | | || | | || ||||| || | |||| || || || |||| || || Sbjct 16699 GTGGAA-CTCTGGTCGGAGATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGG 16641 Query 16423 CATCGTTTCTATGGCCTTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTA 16480 || ||||| | || | |||| | || | || | | | | | || ||||| Sbjct 16640 AATGGTTTCAACAGCGTCGAACAGGAAGTCGCGTTGAGCGGGCTCTT--TGATGTACGTG 16583 Query 16481 TCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG 16540 || || || | | ||| |||| ||||| ||||| || || ||||| || |||||| Sbjct 16582 TCGATGAGGAGAGAGTAGGTTTCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAG 16523 Query 16541 AAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTC 16600 ||||| |||||||| || ||||||||| || | || ||||| ||||| ||||| Sbjct 16522 AAGCAACGAGCCTCGGCGGCTTGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTG 16463 Query 16601 ACGATACCGTCA 16612 |||||||||||| Sbjct 16462 ACGATACCGTCA 16451 >seq175565 Length=26152 Score = 86.0 bits (94), Expect = 6e-12 Identities = 244/373 (65%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| ||||| |||||||| |||| |||||||||||||||||||| ||||||||| Sbjct 8115 AACACGAGACAGGCGAAGTCAGTGTGTATCCCTTCGTCTCTGCTGATAAGCTCGTTGGAA 8174 Query 16253 AAAGTTAACCCTGGC--ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACC 16310 || || | || ||| | |||||| ||||| | ||| |||| | ||||| || | Sbjct 8175 AACGTGAGGCCGGGCAAAAGGTTCCTC--TTCTTGAGCCAATATATGGAGGCAAACGAGC 8232 Query 16311 CCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCAT 16370 ||| ||| || || || ||| | || || |||| | || ||| | | || Sbjct 8233 TCGAGAAGTGGATTCCTTCGACACAAGCGAATGCGACGATTCTCGTGGCGAATGAAGAGG 8292 Query 16371 CTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTT 16430 || || | ||||||||| | |||| | ||||| || || || || | | Sbjct 8293 TTTCATCGCCTATCCATTTCAGGGCCCACGCTGCTTTGTGAGCGATGCATGGGATGGACT 8352 Query 16431 CTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTA 16490 | || || ||||| | ||| || ||| || ||| | || || || | | || | Sbjct 8353 CGATTGCTTTAAAGAGTTTGTCGCGCTCCGTAACGTCGCTGATGTAGGTTTGTAGAAGGA 8412 Query 16491 AACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAG 16550 || |||| | || || ||||| ||||||||||| | ||| ||||| || | Sbjct 8413 GTGCATATGTTTCGGCATGGATATTCTCCATGGCTATCTGCATTCCGTAGAATGCGCGTG 8472 Query 16551 CCTCCGCTATTTG 16563 |||| | |||||| Sbjct 8473 CCTCGGGTATTTG 8485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510247806219480