Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq181137 98.7 8e-16 seq179408 95.1 1e-14 seq179407 95.1 1e-14 seq178676 95.1 1e-14 >seq181137 Length=58212 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | ||| | || |||||||| || ||||| ||||| | Sbjct 1843 CCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAT 1902 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || |||| || ||||| || || ||| | ||||| | ||||||||| ||| Sbjct 1903 AAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGA 1962 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| |||||| | | | | ||||| | |||| Sbjct 1963 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACC 2022 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || ||||| || ||||| Sbjct 2023 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 >seq179408 Length=3068 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 |||| || ||| |||| ||||||||||||||||| || ||||||||||||| ||||||| Sbjct 2859 CGCA-CCGGAGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTT 2917 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 || | ||||| ||||| || || || | || || | ||||||||| Sbjct 2918 CGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 2964 >seq179407 Length=3065 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 |||| || ||| |||| ||||||||||||||||| || ||||||||||||| ||||||| Sbjct 2856 CGCA-CCGGAGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTT 2914 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 || | ||||| ||||| || || || | || || | ||||||||| Sbjct 2915 CGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 2961 >seq178676 Length=5582 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 |||| || ||| |||| ||||||||||||||||| || ||||||||||||| ||||||| Sbjct 4693 CGCA-CCGGAGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTT 4635 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 || | ||||| ||||| || || || | || || | ||||||||| Sbjct 4634 CGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 4588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421320059779124