Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq174905 260 1e-64 seq181137 116 4e-21 seq173931 95.1 1e-14 >seq174905 Length=21728 Score = 260 bits (288), Expect = 1e-64 Identities = 462/668 (69%), Gaps = 13/668 (2%) Strand=Plus/Plus Query 116623 ACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGA 116682 ||||| | || | || |||| |||||||| || || ||||||||||||||||| | || Sbjct 16292 ACAATGCTCGCAGATCTGGCAGATGTACAAGAAAGCGGAGGCGTCGTTCTGGACAGCTGA 16351 Query 116683 GGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCG 116739 ||| |||| || || ||||| |||||| | ||| |||||||||||||||| Sbjct 16352 AGAGATGGATCTCTCGAAGGATCTTCATGACTGGAACAACCGCCTGAACGACAACGAGCG 16411 Query 116740 CCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAA 116799 ||| ||||| ||||| || || || ||||| || ||||| |||||||| || || Sbjct 16412 CCACTTCATTTCACACGTTCTCGCTTTCTTCGCGGCGTCTGACGGTATCGTCAATGAAAA 16471 Query 116800 TCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859 || |||| || ||| | || || || | |||||||| || |||||||| ||||| Sbjct 16472 CCTTCTCGAACGCTTCTCCGGTGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTT 16531 Query 116860 TCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT 116919 ||||| ||||| ||| | ||||| |||| || || |||||||||||||||| | Sbjct 16532 CCAGATTATGATGGAAAACATCCACTCCGAAACCTACTCTCTCCTCATCGACACGTACAT 16591 Query 116920 ----GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCG 116975 | || | | | || || | |||| |||| | || || || || ||| Sbjct 16592 CAAAGAGCCCGCTCAACGCGA--CTTC--CTGTTCGACGCTGTTGAAACCATTCCCTGCA 16647 Query 116976 TCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCG-GCAGAGAGGCCGCCTTCGGC 117034 ||||| ||||| || ||||| || |||||| ||| ||||| || | ||||| Sbjct 16648 TCAAACGCAAGGCTGACTGGGCCCTCAAGTGGATCTCCGACCAGAG-TTCCACTTTCGGT 16706 Query 117035 GAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCC 117094 || ||||| || ||||| || ||||| ||||| | |||||||| || ||||| || Sbjct 16707 GAACGCCTTGTCGCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCC 16766 Query 117095 ATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATC 117154 || || ||| | ||||| || || | ||||||||| |||| ||| ||||||||||||| Sbjct 16767 ATCTTCTGGATGAAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATC 16826 Query 117155 TCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAG 117214 | || |||||| |||| |||||| ||||| | |||||| || || | Sbjct 16827 AGTCGCGATGAGGGTATGCACACCGACTTCGCCTGCCTTTTGTTCAGCCACCTGAGACGT 16886 Query 117215 CGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGC 117274 || || | | | ||||| | | ||| |||| || || |||| ||| |||||| Sbjct 16887 CGTCCTCACCCCGATACCGTCAAGCACATCATCACTGAAGCTGTCGGCATTGAGCAGGAG 16946 Query 117275 TTCCTCAC 117282 ||||| || Sbjct 16947 TTCCTGAC 16954 Score = 190 bits (210), Expect = 2e-43 Identities = 383/564 (68%), Gaps = 17/564 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || || ||||| | || || |||| | Sbjct 15226 ATCTGGCAGATGTACAAGAAGGCGGAGGCATCATTTTGGACTGCTGAAGAACTGGATTTA 15167 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 || | ||| | |||||| | | | ||||||||||| |||||||| || Sbjct 15166 TCTCACGACCTAATGGACTGGAACAACAATCTAAACGACAACGAACGCCATTTTATTTCA 15107 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| || ||||| ||||| |||||||| || ||||| || | ||| Sbjct 15106 CACATCCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATCTTGTTCAACGT 15047 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || || || ||||| || || || ||||| || ||||| || ||| Sbjct 15046 TTCTCCAACGAAGTACAAGTCGCCGAAGCACGCTGTTTCTATGGGTTTCAAATTATGATG 14987 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC-----GTGCGCTCTT 116927 |||||||| ||| | || | ||||| ||||||||||| ||| | | | | Sbjct 14986 GAGAACGTCCACGCAGAGACCTATTCCCTTCTCATCGACACCTACATCAAGGACCCAAAT 14927 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | | |||| || |||| ||||||| ||||| || || ||| |||| |||| Sbjct 14926 C-AAAGAGAGTATCTATTTG----ACGCCATAGAGACAATTCCTTGCATCAAGCGCAAGG 14872 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 | || ||||| || ||||| | | | || || | || | ||||| || || | Sbjct 14871 CTGAATGGGCCCTCAAGTGGATATCTGACGAAGGCTCCACATTTGCTGAGCGTCTAGTCG 14812 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || || ||||| ||| ||||||| || ||| ||||| | ||||||||| | | Sbjct 14811 CTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGGATAA 14752 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||| || || |||||||| ||| | || ||||| || || |||||| | | || || Sbjct 14751 AGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCA--AATGAACTCATCAGCCGAGATGA 14694 Query 117166 GGGTCTGCATTGCGACTTTGCCTG 117189 ||| ||||| ||| || ||||| Sbjct 14693 GGGAATGCATACCGATTTCGCCTG 14670 >seq181137 Length=58212 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || |||||| |||| || || || | Sbjct 1841 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCCTCT 1782 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | || || |||||||||||| | ||||| Sbjct 1781 GACACCATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAA 1722 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 1721 CAACGTCTTATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCTGATTACAAC 1662 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||| ||| | || || ||||| || Sbjct 1661 ATTCAGAAAGAGTCGACTCTCCATCTCGT 1633 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| |||||||| | || || || | | Sbjct 2069 ATGCAGATCTTTGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTGGAGTCTTCG 2010 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | || | ||| |||| ||||| ||||| || ||| | ||||| Sbjct 2009 GATACCATTGACAACG-TGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 1951 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || |||| || ||| | ||||||||| Sbjct 1950 GCAGCGTCTTATCTTTGCCGGGAAGCAGCTCGAAGACGGCCGTACCTTATCCGACTACAA 1891 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 1890 CATCCAGAAGGAGTCTACCCTTCATCTCGT 1861 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||||||||| || ||||| | || || || | | Sbjct 1614 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTC 1555 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| | |||| || || | ||||| || ||||| || | || | Sbjct 1554 GGACACCATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 1496 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| ||||||| ||| || || ||| |||| || | || ||||| || || | Sbjct 1495 AGCAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATA 1436 Query 40868 ACATCCAGAAGGAGGCCACGCTGCAT 40893 | |||||||||||| | || || ||| Sbjct 1435 ATATCCAGAAGGAGTCGACTCTTCAT 1410 >seq173931 Length=6298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | || |||||||| || |||| || || || ||||| || || | ||||| Sbjct 5613 ATCCCCCCCGATCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACT 5672 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| |||||||||||||||||||||| | || || || || |||||||| Sbjct 5673 CTCAGCGACTACAACATCCAGAAGGAGTCTACTCTCCACCTGGTGTTGCG 5722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514043927042640