Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq181137 111 1e-19 seq173931 105 6e-18 >seq181137 Length=58212 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || |||||||| |||||||||||||| | ||||| ||| |||||||| Sbjct 1639 TGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCGAGCTGC 1698 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| |||| ||||| || || || || || ||||||||||| || || || Sbjct 1699 TTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTC 1758 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | | ||| ||||||| ||| | ||| || || || Sbjct 1759 GCCTTCACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTCCCTGTG 1818 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||||||| Sbjct 1819 AGGGTCTTGACGAAGATCTGCATG 1842 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || |||||||| ||| | || || || |||||||| || || Sbjct 1873 GTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCGAGCTGCTTCCCG 1932 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||| || || || || |||||||||||| ||| ||| ||| Sbjct 1933 GCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTTGCTTTC 1992 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| |||| ||| ||||| | || | || ||||| || || || Sbjct 1993 ACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTC 2052 Query 118722 TTTACAAAAATCTGCATG 118739 || ||||| ||||||||| Sbjct 2053 TTAACAAAGATCTGCATG 2070 >seq173931 Length=6298 Score = 105 bits (116), Expect = 6e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||||| |||||||| || || |||||||| ||||| | |||||| ||| Sbjct 5720 CAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGACCATC 5661 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||||| |||||||| |||| ||||| ||||||||||| || || Sbjct 5660 TTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCGGGGGGGAT 5613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432865524450388