Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq181137 111 1e-19 >seq181137 Length=58212 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || || || | ||| || ||||| |||||||||||||| Sbjct 1843 CCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAT 1902 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | |||| |||| || | |||||| || || || || || ||||||||||| ||| Sbjct 1903 AAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGA 1962 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||| |||||||| | | | | || | ||| | || || || Sbjct 1963 ATACCCTCCTTGTCTTGAATC-TTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCAC 2021 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || |||||||||||||| Sbjct 2022 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || || || || || || ||| | || ||||||||||| || ||||| Sbjct 1423 TCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCGGCGAAG 1482 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || ||||| || || | || |||||||| ||||| ||| | | | Sbjct 1483 ATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTG 1542 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || |||| |||||| || ||||| ||||| || || || Sbjct 1543 TCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACG 1602 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 1603 AAGATCTGCAT 1613 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || || || | ||| |||||||| |||||||| || || Sbjct 1614 TCCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGA 1673 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||||||||| ||||| || || || || ||||| ||| Sbjct 1674 AAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGG 1733 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||| || ||||| ||| | || | || | || | || || || Sbjct 1734 GATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCAC 1793 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || ||||| || || || ||||||||||| Sbjct 1794 CTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322353460511840